LOCUS AK296373 3687 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61591 partial cds, highly similar to Probable
global transcription activator SNF2L2 (EC 3.6.1.-).
ACCESSION AK296373
VERSION AK296373.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3687)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3687
/clone="BRTHA3009138"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000490997"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 808..>3687
/codon_start=1
/note="highly similar to Probable global transcription
activator SNF2L2 (EC 3.6.1.-)"
/protein_id="BAG59047.1"
/transl_table=1
/translation="MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERK
RRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKE
RMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKR
RRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQL
DAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAK
QIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLE
WMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYE
FDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMI
VDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCS
TFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYV
IKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQ
HIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTI
MEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAAD
TVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK
VIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMR
MDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRD
VDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVNKIPVIS"
BASE COUNT 1090 a 864 c 977 g 756 t
ORIGIN
1 agaagaggag gggacggctg tcatcaatga agtcatattc ataatctagt cctctctccc
61 tctgtttctg tactctgggt gactcagaga gggaagagat tcagccagca cactcctcgc
121 gagcaagcat tactctactg actggcagag acaggagagg tagatgtcca cgcccacaga
181 ccctggtgcg atgccccacc cagggccttc gccggggcct gggccttccc ctgggccaat
241 tcttgggcct agtccaggac caggaccatc cccaggttcc gtccacagca tgatggggcc
301 aagtcctgga cctccaagtg tctcccatcc tatgccgaca atggggtcca cagacttccc
361 acaggaaggc atgcatcaaa tgcataagcc catcgatggt atacatgaca aggggattgt
421 agaagacatc cattgtggat ccatgaaggg cactggtatg cgaccacctc acccaggcat
481 gggccctccc cagagtccaa tggatcaaca cagccaaggt tatatgtcac cacacccatc
541 tccattagga gccccagagc acgtctccag ctgcagcaga agcagagccg catcagcccc
601 atccagaaac cgcaaggcct ggaccccgtg gaaattctgc aagagcggga atacagactt
661 caggcccgca tagctcatag gatacaagaa ctggaaaatc tgcctggctc tttgccacca
721 gatttaagaa ccaaagcaac cgtggaacta aaagcacttc ggttactcaa tttccagcgt
781 cagctgagac aggaggtggt ggcctgcatg cgcagggaca cgaccctgga gacggctctc
841 aactccaaag catacaaacg gagcaagcgc cagactctga gagaagctcg catgaccgag
901 aagctggaga agcagcagaa gattgagcag gagaggaaac gccgtcagaa acaccaggaa
961 tacctgaaca gtattttgca acatgcaaaa gattttaagg aatatcatcg gtctgtggcc
1021 ggaaagatcc agaagctctc caaagcagtg gcaacttggc atgccaacac tgaaagagag
1081 cagaagaagg agacagagcg gattgaaaag gagagaatgc ggcgactgat ggctgaagat
1141 gaggagggtt atagaaaact gattgatcaa aagaaagaca ggcgtttagc ttaccttttg
1201 cagcagaccg atgagtatgt agccaatctg accaatctgg tttgggagca caagcaagcc
1261 caggcagcca aagagaagaa gaagaggagg aggaggaaga agaaggctga ggagaatgca
1321 gagggtgggg agtctgccct gggaccggat ggagagccca tagatgagag cagccagatg
1381 agtgacctcc ctgtcaaagt gactcacaca gaaaccggca aggttctgtt cggaccggaa
1441 gcacccaaag caagtcagct ggacgcctgg ctggaaatga atcctggtta tgaagttgcc
1501 cctagatctg acagtgaaga gagtgattct gattatgagg aagaggatga ggaagaagag
1561 tccagtaggc aggaaaccga agagaaaata ctcctggatc caaatagcga agaagtttct
1621 gagaaggatg ctaagcagat cattgagaca gctaagcaag acgtggatga tgaatacagc
1681 atgcagtaca gtgccagggg ctcccagtcc tactacaccg tggctcatgc catctcggag
1741 agggtggaga aacagtctgc cctcctaatt aatgggaccc taaagcatta ccagctccag
1801 ggcctggaat ggatggtttc cctgtataat aacaacttga acggaatctt agccgatgaa
1861 atggggcttg gaaagaccat acagaccatt gcactcatca cttatctgat ggagcacaaa
1921 agactcaatg gcccctatct catcattgtt cccctttcga ctctatctaa ctggacatat
1981 gaatttgaca aatgggctcc ttctgtggtg aagatttctt acaagggtac tcctgccatg
2041 cgtcgctccc ttgtccccca gctacggagt ggcaaattca atgtcctctt gactacttat
2101 gagtatatta taaaagacaa gcacattctt gcaaagattc ggtggaaata catgatagtg
2161 gacgaaggcc accgaatgaa gaatcaccac tgcaagctga ctcaggtctt gaacactcac
2221 tatgtagccc ccagaaggat cctcttgact gggaccccgc tgcagaataa gctccctgaa
2281 ctctgggccc tcctcaactt cctcctccca acaattttta agagctgcag cacatttgaa
2341 caatggttca atgctccatt tgccatgact ggtgaaaggg tggacttaaa tgaagaagaa
2401 actatattga tcatcaggcg tctacataag gtgttaagac catttttact aaggagactg
2461 aagaaagaag ttgaatccca gcttcccgaa aaagtggaat atgtgatcaa gtgtgacatg
2521 tcagctctgc agaagattct gtatcgccat atgcaagcca aggggatcct tctcacagat
2581 ggttctgaga aagataagaa ggggaaagga ggtgctaaga cacttatgaa cactattatg
2641 cagttgagaa aaatctgcaa ccacccatat atgtttcagc acattgagga atcctttgct
2701 gaacacctag gctattcaaa tggggtcatc aatggggctg aactgtatcg ggcctcaggg
2761 aagtttgagc tgcttgatcg tattctgcca aaattgagag cgactaatca ccgagtgctg
2821 cttttctgcc agatgacatc tctcatgacc atcatggagg attattttgc ttttcggaac
2881 ttcctttacc tacgccttga tggcaccacc aagtctgaag atcgtgctgc tttgctgaag
2941 aaattcaatg aacctggatc ccagtatttc attttcttgc tgagcacaag agctggtggc
3001 ctgggcttaa atcttcaggc agctgataca gtggtcatct ttgacagcga ctggaatcct
3061 catcaggatc tgcaggccca agaccgagct caccgcatcg ggcagcagaa cgaggtccgg
3121 gtactgaggc tctgtaccgt gaacagcgtg gaggaaaaga tcctcgcggc cgcaaaatac
3181 aagctgaacg tggatcagaa agtgatccag gcgggcatgt ttgaccaaaa gtcttcaagc
3241 cacgagcgga gggcattcct gcaggccatc ttggagcatg aggaggaaaa tgaggaagaa
3301 gatgaagtac cggacgatga gactctgaac caaatgattg ctcgacgaga agaagaattt
3361 gaccttttta tgcggatgga catggaccgg cggagggaag atgcccggaa cccgaaacgg
3421 aagccccgtt taatggagga ggatgagctg ccctcctgga tcattaagga tgacgctgaa
3481 gtagaaaggc tcacctgtga agaagaggag gagaaaatat ttgggagggg gtcccgccag
3541 cgccgtgacg tggactacag tgacgccctc acggagaagc agtggctaag ggccatcgaa
3601 gacggcaatt tggaggaaat ggaagaggaa gtacggctta agaagcgaaa aagacgaaga
3661 aatgtaaata aaattccagt aatttcg
//