LOCUS AK296329 3352 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59555 complete cds, highly similar to
Trophinin.
ACCESSION AK296329
VERSION AK296329.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3352)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3352
/clone="BRTHA3002829"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000490953"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 227..3115
/codon_start=1
/note="highly similar to Trophinin"
/protein_id="BAG59020.1"
/transl_table=1
/translation="MLRDVIQEYDEYFPEIIERASYTLEKMFRVNLKEIDKQSSLYIL
ISTQESSAGILGTTKDTPKLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLRPGVRHS
LFGEVRKLITDEFVKQKYLEYKRVPNSRPPEYEFFWGLRSYHETSKMKVLKFACRVQK
KDPKDWAVQYREAVEMEVQAAAVAVAEAEARAEARAQMGIGEEAVAGPWNWDDMDIDC
LTREELGDDAQAWSRFSFEIEARAQENADASTNVNFSRGASTRAGFSDGASISFNGAP
SSSGGFSGGPGITFGVAPSTSASFSNTASISFGGTLSTGSSFSSAASISFGCAHSTST
SFSSEASISFGGMPCTSASFSGGVSSGFSGPLSTSATFSGGASSGFGGTLSTTAGFSG
VLSTSTSFGSAPTTSTVFSSALSTSTGFGGILSTSVCFGGSPSSSGSFGGTLSTSICF
GGSPCTSTGFGGTLSTSVSFGGSSSTSANFGGTLSTSICFDGSPSTGAGFGGALNTSA
SFGSVLNTSTGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVST
NTDFGGTLSTSVCFGGSPSTSAGFGGALNTNASFGCAVSTSASFSGAVSTSACFSGAP
ITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGG
APSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFCDGPSTSTGFSFGNGLSTNAGF
GGGLNTSAGFGSGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSA
GFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNA
SFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTGVGFCSGPST
SGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGAASLGACGFSYG"
BASE COUNT 721 a 826 c 974 g 831 t
ORIGIN
1 agacacaagg agaggcttgg agagagcaga cgccttctgg attcaagaag acgagtccaa
61 gcatctgaac ggggatgaga gaagtggcag taattacagg cggatcccat ggggccggag
121 gcctgcacca ccgcgagatg tggccatttt acaagaaagg gctaataagt tggtgaaata
181 cctgttggtt aaggaccaga caaagatccc catcaaacgc tcagacatgc tgagggatgt
241 catccaagaa tatgatgaat atttcccaga aatcattgaa cgagcaagct acactctgga
301 gaagatgttt cgagtcaatc tgaaagaaat tgataagcaa agtagcttgt atattctcat
361 cagcactcag gaatcctctg caggcatact gggaacgacc aaggacacac ccaagctggg
421 tctcctcatg gtgattctga gtgtcatttt tatgaatggc aacaaggcca gtgaggctgt
481 catctgggag gtgctgcgca agttggggct gcgccctggg gtgaggcatt cactctttgg
541 ggaagtgagg aagctcatca cagacgagtt tgtgaagcag aagtacctgg agtacaagag
601 ggtccctaac agcagaccac ctgaatatga gttcttctgg ggcttgcgct cctaccacga
661 gactagcaag atgaaagtcc tcaagtttgc atgcagggtg cagaagaaag accccaagga
721 ctgggctgtg cagtaccgcg aggcagtgga gatggaagtc caagctgcag ctgtggctgt
781 ggctgaggct gaagccaggg ctgaggcaag agcccaaatg gggattggag aggaagctgt
841 ggctgggccc tggaattggg atgacatgga tatcgactgc ctaacaaggg aagagttagg
901 cgatgatgct caggcctgga gcagattttc atttgaaatt gaggccagag cccaagaaaa
961 tgcagatgcc agcaccaacg tcaacttcag cagaggagct agtaccaggg ctggcttcag
1021 cgatggtgct agtattagct tcaatggtgc acccagctcc agtggtggct tcagtggtgg
1081 acctggcatt acctttggtg ttgcacccag caccagtgcc agcttcagca atacagccag
1141 cattagcttt ggtggtacac tgagcactgg ctccagcttc agcagcgcag ccagcattag
1201 ctttggttgt gcacacagca ccagcactag tttcagcagt gaagccagca ttagctttgg
1261 tggcatgcct tgtaccagtg ccagctttag tggtggagtc agctctggtt ttagtggccc
1321 actcagcacc agtgccactt tcagtggtgg agccagctct ggctttggag gcacactcag
1381 caccacggct ggctttagtg gtgtactcag cactagcacc agctttggca gtgcacccac
1441 aacgagcaca gtcttcagta gtgcgcttag caccagcact ggctttggag gcatactcag
1501 caccagtgtc tgttttggtg gctctcccag ctccagtggt agctttggtg gtacactcag
1561 taccagtatc tgcttcggtg gctctccctg caccagcact ggctttggag gcacacttag
1621 caccagtgtc tcctttggtg gctcttccag caccagtgcc aattttggtg gtacactaag
1681 taccagcatc tgctttgatg gctctcccag cactggtgct ggctttggtg gtgctctcaa
1741 caccagtgcc agctttggca gtgtgctcaa caccagtact ggttttggtg gtgctatgag
1801 caccagtgct gactttggcg gtacactaag caccagtgtc tgctttggtg gctctcctgg
1861 caccagtgtc agctttggca gtgcactcaa caccaatgct ggttatggtg gtgctgtcag
1921 caccaacact gactttggtg gtacactaag caccagcgtc tgttttggtg gctctcccag
1981 caccagtgct ggctttggtg gtgcactcaa caccaatgcc agctttggct gtgccgtcag
2041 caccagtgcc agcttcagtg gtgctgtcag caccagtgct tgcttcagtg gtgcaccaat
2101 caccaaccct ggctttggcg gtgcatttag caccagtgct ggcttcggtg gggcacttag
2161 taccgctgct gacttcggtg gtactcccag caacagcatt ggctttggtg ctgctcccag
2221 caccagtgtc agctttggtg gtgctcatgg caccagcctc tgttttggtg gagctcccag
2281 caccagcctc tgctttggca gtgcatctaa tactaaccta tgctttggtg gccctcctag
2341 caccagtgcc tgctttagtg gtgctaccag ccctagtttt tgtgatggac ccagcaccag
2401 taccggtttc agctttggca atgggttaag caccaatgct ggatttggtg gtggactgaa
2461 caccagtgct ggctttggta gtggcctagg caccagtgct ggcttcagtg gtggcctaag
2521 cacaagttct ggctttgatg gtgggctagg taccagcgct ggcttcggtg gaggaccagg
2581 caccagcact ggttttggtg gtggactggg caccagtgct ggcttcagtg gcggactggg
2641 caccagtgct ggctttggtg gtggactggt cactagtgat ggctttggtg gtggactggg
2701 caccaatgct agtttcggca gcacacttgg caccagtgct ggctttagtg gtggcctcag
2761 caccagcgat ggctttggca gtaggcctaa tgccagcttc gacagaggac tgagtaccat
2821 cattggcttt ggcagtggtt ccaacaccag cactggcttt actggcgaac ccagcaccag
2881 cacgggcttc agtagtggac ccagttctat tgttggcttc agcggtggac caagcactgg
2941 tgttggcttc tgcagtggac caagcaccag tggcttcagc ggtggaccga gcacaggagc
3001 tggcttcggc ggtggaccaa acactggtgc tggctttggt ggtggaccga gcaccagtgc
3061 tggctttggc agtggagccg ccagtcttgg tgcctgtggc ttctcgtatg gctagtgagg
3121 tttcagattt attccccatg tttacagata ccgctaataa attgcagtag tccttcccat
3181 ggagccaaag tacatccttg gaatctttgt ccacacagca gtcaaggcag ttatggccaa
3241 tcagctgagg gtgtcatgtg atggaaaaat ctgtttgctg ttcctgcttt attgtttgct
3301 ttctgtgtgc tgtcatattt tggtatcaga gttacattaa atttgcaaaa tg
//