LOCUS AK296295 1366 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59552 complete cds, highly similar to Zinc
finger FYVE domain-containing protein 27.
ACCESSION AK296295
VERSION AK296295.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1366)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1366
/clone="BRTHA2037225"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490919"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 228..1163
/codon_start=1
/note="highly similar to Zinc finger FYVE
domain-containing protein 27"
/protein_id="BAH12306.1"
/transl_table=1
/translation="MISVPALLGYLQEVCRARLPDSELMRRKYHSVRQEDLQRVRLSR
PEAVAEVKSFLIQLEAFLSRLCCTCEAAYRVLHWENPVVSSQFYGALLGTVCMLYLLP
LCWVLTLLNSTLFLGNVEFFRVVSEYRASLQQRMNPKQEEHAFESPPPPDVGGKDGLM
DSTPALTPTESLSSQDLTPGSVEEAEEAEPDEEFKDAIEEDDEGAPCPAEDELALQDN
GFLSKNEVLRSKVSRLTERLRKRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSR
CCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK"
BASE COUNT 257 a 403 c 431 g 275 t
ORIGIN
1 gcagagcgat tcgcgtcccg gaagcggcgg tgacggccgc ggcgtaggcg gaggagattt
61 tcggacctgc gacttccgaa caaccctggc aggaggagcg gcgttcagcc gggggaggcc
121 tgaagaaacg ctccggggcc cagtggctct acccctgctc ctgcccgacc ctgccccctc
181 cctcacggag ccagcggccg ggtgcatggt actcagtagg tgccctgatg atttcagtgc
241 ccgccctgct gggctacctt caggaggttt gccgggcacg gctgcctgat tccgagctga
301 tgcggaggaa gtatcatagc gtgaggcagg aggacctgca gagagttcgc ctgtctcgtc
361 ccgaggccgt ggctgaggtg aagagcttct tgatccagct ggaggccttc ctgagccgcc
421 tgtgctgcac atgtgaagcc gcctaccgcg tgctgcactg ggagaacccc gtcgtgtcct
481 cacagttcta tggggctctt ctgggcacag tctgcatgct gtatttgctg ccactctgct
541 gggttctcac ccttttaaac agcacgctct ttctggggaa tgtggagttc ttccgagttg
601 tgtctgagta cagggcatct ctgcagcaga ggatgaaccc aaagcaggaa gagcatgcct
661 ttgagagtcc tccaccacca gatgttgggg ggaaggatgg tctgatggac agcacgcctg
721 ccctcacacc cacggagagt ctctcttccc aggacctcac accgggcagc gtggaggagg
781 ctgaggaggc tgagccagat gaagagttta aagatgcgat tgaggaggat gatgagggcg
841 ccccgtgccc agcagaggat gagctggccc tgcaggacaa cgggttcctg agcaagaatg
901 aggtgctgcg cagcaaggtg tctcggctca cggagcggct ccgcaagcgc taccccacca
961 acaacttcgg gaactgcacg ggctgctcgg ccaccttctc agtgctgaag aagaggcgga
1021 gctgcagtaa ttgtggaaac agcttctgct ctcgatgctg ctccttcaag gtgcccaagt
1081 cctccatggg ggccacagcc cctgaagccc agagggagac tgtgtttgtg tgtgcctcgt
1141 gtaaccagac cttgagcaag tgagaagaga ggccagggtc caaccaggca cccgtccttg
1201 gggccagcag tagacccccc actctcccca cccctggccc actgtggtgt gtgctgggca
1261 aatgtggcct gaatgctagg taggcttccc cttccttcct cactctctcc agctggattc
1321 tggagctgtt ctccatccat gagagtggct ggcaatggct gctctc
//