LOCUS AK296243 3164 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55278 complete cds, highly similar to
AF4/FMR2 family member 1.
ACCESSION AK296243
VERSION AK296243.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3164)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3164
/clone="BRTHA2027030"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490867"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 205..2754
/codon_start=1
/note="highly similar to AF4/FMR2 family member 1"
/protein_id="BAG58961.1"
/transl_table=1
/translation="MTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHVSSVTQNQKQYD
TSSKTHSNSQQGTSSMLEDDLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASA
HSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLTKV
SQPAAPPEGPRSTEPPRRHPESKGSSDSATSQEHSESKDPPPKSSSKAPRAPPEAPHP
GKRSCQKSPAQQEPPQRQTVGTKQPKKPVKASARAGSRTSLQGEREPGLLPYGSRDQT
SKDKPKVKTKGRPRAAASNEPKPAVPPSSEKKKHKSSLPAPSKALSGPEPAKDNVEDR
TPEHFALVPLTESQGPPHSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRD
TPPPQSLMVKITLDLLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSSKLAK
KRKGEAERDCDNKKIRLEKEIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPV
SSSSQKPAKPALKRSRREADTCGQDPPKSASSTKSNHKDSSIPKQRRVEGKGSRSSSE
HKGSSGDTANPFPVPSLPNGNSKPGKPQVKFDKQQADLHMREAKKMKQKAELMTDRVG
KAFKYLEAVLSFIECGIATESESQSSKSAYSVYSETVDLIKFIMSLKSFSDATAPTQE
KIFAVLCMRCQSILNMAMFRCKKDIAIKYSRTLNKHFESSSKVAQAPSPCIARSTGTP
SPLSPMPSPASSVGSQSSAGSVGSSGVAATISTPVTIQNMTSSYVTTTSHVLTAFDLW
EQAEALTRKNKEFFARLSTNVCTLALNSSLVDLVHYTRQGFQQLQELTKTP"
BASE COUNT 922 a 916 c 742 g 584 t
ORIGIN
1 gtagtcccgt aacatcgggg cgccgcgccg ggacgcgtcc ccgcccggct ccgccaaatg
61 gtgagcgcgg cgctggcagc agggcccgcg gggtgaaggc gctcatggac ggaagacccc
121 tggctctata agctgaatta tggcagccca gtcaagcaga cctactccaa tgaagtccat
181 tgtgttgaag agattctgaa ggaaatgacc cattcatggc cgcctccttt gacagcaata
241 catacgccta gtacagctga gccatccaag tttcctttcc ctacaaagga ctctcagcat
301 gtcagttctg taacccaaaa ccaaaaacaa tatgatacat cttcaaaaac tcactcaaat
361 tctcagcaag gaacgtcatc catgctcgaa gacgaccttc agctcagtga cagtgaggac
421 agtgacagtg aacaaacccc agagaagcct ccctcctcat ctgcacctcc aagtgctcca
481 cagtcccttc cagaaccagt ggcatcagca cattccagca gtgcagagtc agaaagcacc
541 agtgactcag acagttcctc agactcagag agcgagagca gttcaagtga cagcgaagaa
601 aatgagcccc tagaaacccc agctccggag cctgagcctc caacaacaaa caaatggcag
661 ctggacaact ggctgaccaa agtcagccag ccagctgcgc caccagaggg ccccaggagc
721 acagagcccc cacggcggca cccagagagt aagggcagca gcgacagtgc cacgagtcag
781 gagcattctg aatccaaaga tcctccccct aaaagctcca gcaaagcccc ccgggcccca
841 cccgaagccc cccaccccgg aaagaggagc tgtcagaagt ctccggcaca gcaggagccc
901 ccacaaaggc aaaccgttgg aaccaaacaa cccaaaaaac ctgtcaaggc ctctgcccgg
961 gcaggttcac ggaccagcct gcagggggaa agggagccag ggcttcttcc ctatggctcc
1021 cgagaccaga cttccaaaga caagcccaag gtgaagacga aaggacggcc ccgggccgca
1081 gcaagcaacg aacccaagcc agcagtgccc ccctccagtg agaagaagaa gcacaagagc
1141 tccctccctg ccccctctaa ggctctctca ggcccagaac ccgcgaagga caatgtggag
1201 gacaggaccc ctgagcactt tgctcttgtt cccctgactg agagccaggg cccaccccac
1261 agtggcagcg gcagcaggac tagtggctgc cgccaagccg tggtggtcca ggaggacagc
1321 cgcaaagaca gactcccatt gcctttgaga gacaccaagc tgctctcacc gctcagggac
1381 actcctcccc cacaaagctt gatggtgaag atcaccctag acctgctctc tcggataccc
1441 cagcctcccg ggaaggggag ccgccagagg aaagcagaag ataaacagcc gcccgcaggg
1501 aagaagcaca gctctgagaa gaggagctca gacagctcaa gcaagttggc caaaaagaga
1561 aagggtgaag cagaaagaga ctgtgataac aagaaaatca gactggagaa ggaaatcaaa
1621 tcacagtcat cttcatcttc atcctcccac aaagaatctt ctaaaacaaa gccctccagg
1681 ccctcctcac agtcctcaaa gaaggaaatg ctccccccgc cacccgtgtc ctcgtcctcc
1741 cagaagccag ccaagcctgc acttaagagg tcaaggcggg aagcagacac ctgtggccag
1801 gaccctccca aaagtgccag cagtaccaag agcaaccaca aagactcttc cattcccaag
1861 cagagaagag tagaggggaa gggctccaga agctcctcgg agcacaaggg ttcttccgga
1921 gatactgcaa atccttttcc agtgccttct ttgccaaatg gtaactctaa accagggaag
1981 cctcaagtga agtttgacaa acaacaagca gaccttcaca tgagggaggc aaaaaagatg
2041 aagcagaaag cagagttaat gacggacagg gttggaaagg cttttaagta cctggaagcc
2101 gtcttgtcct tcattgagtg cggaattgcc acagagtctg aaagccagtc atccaagtca
2161 gcttactctg tctactcaga aactgtagat ctcattaaat tcataatgtc attaaaatcc
2221 ttctcagatg ccacagcgcc aacacaagag aaaatatttg ctgttttatg catgcgttgc
2281 cagtccattt tgaacatggc gatgtttcgt tgtaaaaaag acatagcaat aaagtattct
2341 cgtactctta ataaacactt cgagagttct tccaaagtcg cccaggcacc ttctccatgc
2401 attgcaagaa gcacaggcac accatcccct ctttccccaa tgccttctcc tgccagctcc
2461 gtagggtccc agtcaagtgc tggcagtgtg gggagcagtg gggtggctgc cactatcagc
2521 accccagtca ccatccagaa tatgacatct tcctatgtca ccaccacatc ccatgttctt
2581 accgcctttg acctttggga acaggccgag gccctcacga ggaagaataa agaattcttt
2641 gctcggctca gcacaaatgt gtgcaccttg gccctcaaca gcagtttggt ggacctggtg
2701 cactatacac gacagggttt tcagcagcta caagaattaa ccaaaacacc ttaatggagc
2761 cccaggttga ttcaatgcct tgggaactat ttttgcacat tggaagcctc aaaaacagtc
2821 cagacgtttg tttcatcagg acaccaaact ctaaaaaaga agcaccacga gatggccagg
2881 acatttgtcc acttaaactc tcaacaacag tgtgatcatt ggttggacac tgtggttatg
2941 cagaagcaga gatgaggagg ctggccccag agatgatctt gcccttccta actaaaggac
3001 agaagtgcaa tttagcttaa atgggtgtat gaatggtcta gaaacatttc tatttttttt
3061 ttaaaccagc aggatacaag ttgcaaatga aatgaggaga aacagtttca actctgaaag
3121 tgaatttcac gtcatctcag tagccacgct agtccattcc caga
//