LOCUS AK296242 2060 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60279 complete cds, highly similar to
Synaptojanin-2 (EC 3.1.3.36).
ACCESSION AK296242
VERSION AK296242.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2060)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2060
/clone="BRTHA2026538"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490866"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 271..1821
/codon_start=1
/note="highly similar to Synaptojanin-2 (EC 3.1.3.36)"
/protein_id="BAG58960.1"
/transl_table=1
/translation="MFLYASGPAPPAGTCRWGGQGGTSLSFLVLVTGCTSVGRIPDAE
IYKITATDFYPLQEEAKEEERLIALKKILSSGVFYFSWPNDGSRFDLTVRTQKQGDDS
SEWGNSFFWNQLLHVPLRQHQVSCCDWLLKIICGVVTIRTVYASHKQAKACLVSRVSC
ERTGTRFHTRGVNDDGHVSNFVETEQMIYMDDGVSSFVQIRGSVPLFWEQPGLQVGSH
HLRLHRGLEANAPAFDRHMVLLKEQYGQQVVVNLLGSRGGEEVLNRAFKFAKGGKLEK
LETLLRPQLKLHWEDFDVFTKGENVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLH
LQLKTLGLSSKPIVDRFVESFKAMWSLNGHSLSKVFTGSRALEGKAKVGKLKDGARSM
SRTIQSNFFDGVKQEAIKLLLVGDVYGEEVADKGGMLLDSTALLVTPRILKAMTERQS
EFTNFKRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQGEGSDFGG
DKIQLHLT"
BASE COUNT 452 a 547 c 582 g 479 t
ORIGIN
1 agtgcaatgg cgcgatctcg gctcaccaca acctctgcct cctgggttca agcaattctc
61 ctgcctcagc ctcctgaata gctgggacta caggcatgcg ccaccatgcc caactaattt
121 tttgtatttt tagtagagac ggggtttttc catgttggtc aggctggtct gaaactccga
181 cctcaggtgg tccacctgcc tcagcctccc aaagtgctgg gattacagcc atgagccgcc
241 gtgcctggcc gacctctctt ctcttttaag atgtttcttt atgcctcggg acctgctcct
301 cctgcaggaa cctgcaggtg gggaggtcaa ggtggcacgt ctctgagctt cctggtgttg
361 gtgacaggct gcacatctgt gggcagaatt ccagatgctg aaatctacaa aatcactgcc
421 actgactttt accctcttca ggaagaggcc aaggaggagg aacgcctcat agctttgaag
481 aaaatcctca gctcgggggt gttctatttc tcatggccaa acgatgggtc tcgctttgac
541 ctgactgtcc gcacgcagaa gcagggggat gacagctctg aatgggggaa ctccttcttc
601 tggaaccagc tgttgcacgt gcccttgagg cagcaccagg tgagctgctg tgactggctg
661 ctgaagatca tctgcggggt ggtcaccatc cgcaccgtgt atgcctccca caagcaggcc
721 aaggcctgcc tcgtctctcg cgttagctgt gagcgcacag gcactcgctt ccacacccgt
781 ggcgtgaacg acgacggcca tgtgtccaac ttcgtggaga cagagcagat gatttacatg
841 gacgatggag tgtcatcttt tgtccagatc agaggctccg ttccgctgtt ctgggaacag
901 ccagggcttc aggttggctc ccatcatctg agactccaca gaggcctgga agccaatgcc
961 cctgctttcg acaggcacat ggtgcttctg aaggagcagt acgggcagca ggtggtcgtg
1021 aaccttctgg gaagcagagg cggagaggag gtgctcaaca gagccttcaa gtttgccaaa
1081 ggtgggaagc tagagaaatt ggagaccctc ttgaggccac agttaaagct gcactgggaa
1141 gacttcgatg tgttcacaaa gggggagaac gtcagtccac gttttcagaa aggcactttg
1201 cggatgaact gtcttgactg cctggaccga accaacactg tgcagagctt catcgcgctc
1261 gaggtcctgc atctgcagct caagaccctg gggctgagtt caaaacccat cgttgaccgc
1321 tttgtggagt ccttcaaagc catgtggtct ctgaatggcc acagcctgag caaggtgttc
1381 acaggcagca gagccctgga agggaaggcc aaggtgggga agctgaagga tggagcccgg
1441 tccatgtctc gaaccatcca gtccaacttc ttcgacgggg tgaagcagga ggccatcaag
1501 ctgctgctgg ttggggacgt ctacggcgag gaggtggcag acaaaggggg catgctgctg
1561 gacagcacgg cgctcctggt gactcccagg atcctgaaag ctatgactga gcgtcagtcc
1621 gaattcacaa atttcaagcg gatccggatt gctatgggga cctggaacgt gaacggagga
1681 aagcagttcc ggagcaacgt gctcaggacg gcggagctga cagactggct gctcgactcg
1741 ccccagctct cgggagctac cgactcccag ggtgagggca gtgactttgg gggagacaaa
1801 atccaattgc acctaacctg acatgtcacg cttgaccctt tagtggccat cgtcttgtgg
1861 aatttcatct ttggtgtctt ccctcctcac aatgtctaaa tagcaccatg gcctgactct
1921 caagaatgct gcctcgcaag taactgacct ttttcctttc ccagatgttt agaagagtta
1981 gcagatggtg aatctctctt ttctctttgc atacagtgat ggtgaagtct taggctttca
2041 tcagtagaat cttttcgtca
//