LOCUS AK296235 2215 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50742 complete cds, highly similar to
Inositol 1,4,5-trisphosphate receptor type 1.
ACCESSION AK296235
VERSION AK296235.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2215)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2215
/clone="BRTHA2025084"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490859"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 275..1579
/codon_start=1
/note="highly similar to Inositol 1,4,5-trisphosphate
receptor type 1"
/protein_id="BAG58955.1"
/transl_table=1
/translation="MLISLAIVIALPKPHGIRALIASTILRLIFSVGLQPTLFLLGAF
NVCNKIIFLMSFVGNCGTFTRGYRAMVLDVEFLYHLLYLVICAMGLFVHEFFYSLLLF
DLVYREETLLNVIKSVTRNGRSIILTAVLALILVYLFSIVGYLFFKDDFILEVDRLPN
ETAVPETGESLASEFLFSDVCRVESGENCSSPAPREELVPAEETEQDKEHTCETLLMC
IVTVLSHGLRSGGGVGDVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLNLIFGVIIDT
FADLRSEKQKKEEILKTTCFICGLERDKFDNKTVTFEEHIKEEHNMWHYLCFIVLVKV
KDSTEYTGPESYVAEMIKERNLDWFPRMRAMSLVSSDSEGEQNELRNLQEKLESTMKL
VTNLSGQLSELKDRMTEQRKQKQRIGLLGHPPHMNVNPQQPA"
BASE COUNT 593 a 450 c 512 g 660 t
ORIGIN
1 gtagcatgat gctcatgaca cggaagttgc ctttctcctt cccttggaga aatctgattc
61 aggcagggga cctgcagttt tcctttgcat acttttaata gaaattaagt ttaggcttcc
121 acgtcgcctt ctttgagtga agtgtgacac atgcatgagt tttatttctc gaacaagctt
181 ttcgtgagta cctgccaggc accaggtact tcccctgggg aatgtgcaat ctggaaccct
241 ggagccccac tggtcgggac tcctgtggac agccatgctc atctctctgg ccatcgtcat
301 tgccctcccc aagccccatg gcatccgggc cttaattgcc tccacaattc tacgactgat
361 attttcagtc gggttacaac ccacgttgtt tcttctgggc gctttcaatg tatgcaataa
421 aatcatcttt ctaatgagct ttgtgggcaa ctgtgggaca ttcacaagag gctaccgagc
481 catggttctg gatgttgagt tcctctatca tttgttgtat ctggtgatct gtgccatggg
541 gctctttgtc catgaattct tctacagtct gctgcttttt gatttagtgt acagagaaga
601 gactttgctt aatgtcatta aaagtgtcac tcgcaatgga cggtccatca tcctgacagc
661 agttctggct ctgatcctcg tttacctgtt ctcaatagtg ggctatcttt tcttcaagga
721 tgactttatc ttggaagtag ataggctgcc caatgaaaca gctgttccag aaaccggcga
781 gagtttggca agcgagttcc tgttctccga tgtgtgtagg gtggagagtg gggagaactg
841 ctcctctcct gcacccagag aagagctggt ccctgcagaa gagacggaac aggataaaga
901 gcacacatgt gagacgctgc tgatgtgcat tgtcaccgtg ctgagtcacg ggctgcggag
961 cgggggtgga gtaggagatg tactcaggaa gccgtccaaa gaggaacccc tgtttgctgc
1021 tagagttatt tatgacctct tgttcttctt catggtcatc atcattgttc ttaacctgat
1081 ttttggggtt atcattgaca cttttgctga cctgaggagt gagaagcaga agaaggaaga
1141 gatcttgaag accacgtgct ttatctgtgg cttggaaaga gacaagtttg acaacaagac
1201 tgtcaccttt gaagagcaca tcaaggaaga acacaacatg tggcactatc tgtgcttcat
1261 cgtcctggtg aaagtaaagg actccaccga atatactggg cctgagagtt acgtggcaga
1321 aatgatcaag gaaagaaacc ttgactggtt ccccaggatg agagccatgt cattggtcag
1381 cagtgattct gaaggagaac agaatgagct gagaaacctg caggagaagc tggagtccac
1441 catgaaactt gtcacgaacc tttctggcca gctgtcggaa ttaaaggatc ggatgacaga
1501 acaaaggaag cagaaacaaa gaattggtct tctaggacat cctcctcaca tgaatgtcaa
1561 cccacaacaa ccagcataag caaatgaaag aaaggaattg tatttacctt ttataattat
1621 tattagtgtg ggtatggcta atgagttctg attcacccac gaaggttaca tttatgctga
1681 atacatttgt aaatactcag ttttatactg tatgtatatg attgctactc taaaggtttg
1741 gatatatgta ttgtaattag aattgttggc atgatgacat ttcatttgtg ccaaaaatat
1801 taaaaatgcc ttttttggaa ggactaacag aaagcacctg atttgcactt gaaccagatt
1861 atagatttaa aagtatatga catgtatttt gtatttaaaa ctagaatagc cagtatttat
1921 gttttttata aaactgtgca atacgaatta tgcaatcaca atacatttgt agctcccgag
1981 tgtcctaaag ggagtgcact tctttgaagc tggtgtgtta atactatgta ataaatggtt
2041 aactttcaaa tgatgctgct gccaaaatta tattaatagt gagtttcagg cccctgggca
2101 ttttgtacca tgtaattatc ctctggtgat gctgtttctc gttagtggca gtagtgcctc
2161 cgtctcctag tgataatgct ccaagtctat gaactgttaa atcagcattc atttt
//