LOCUS AK296230 2002 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55638 complete cds.
ACCESSION AK296230
VERSION AK296230.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2002)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2002
/clone="BRTHA2024491"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490854"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 101..1930
/codon_start=1
/protein_id="BAH12287.1"
/transl_table=1
/translation="MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGAT
GVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRTSKTVVLPEKRSLKLLKSH
NLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSL
SERDIAMATIYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKF
ALNVVDNLVVVHHQDTVTSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPITGPAA
VTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQ
RKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSR
SSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQ
HYLHELVIKTLVQHNLFYMLHLFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLK
RLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFR
FFEQRNQRLRGSPNFTPGEHCEEHVAFFKQIFGDQALMRPTTF"
BASE COUNT 519 a 504 c 467 g 512 t
ORIGIN
1 agccgcagcc gccgctacag tccgggccgg gctccaccgc gcatcctgct ccactctggc
61 gaccgccccc ggggcccccg ccgcgggcgc ggcgcccgcc atgggcgagg aggactacta
121 tctggagctg tgcgagcggc cggtgcagtt cgagaaggcg aaccctgtca actgcgtctt
181 cttcgatgag gccaacaagc aggtttttgc tgttcgatct ggtggagcta ctggcgtggt
241 agttaaaggc ccagatgata ggaatcccat ctcatttaga atggatgaca aaggagaagt
301 gaagtgcatt aagttttcct tagaaaataa gatattggct gttcagagga cctcaaagac
361 tgtggtatta ccagagaaac ggagtctgaa actcttgaag agccacaatc tcaatgtgaa
421 ttggtacatg tactgccccg agagcgccgt gatcttgctg tctaccacgg tcctggagaa
481 tgtcctgcag ccttttcact ttagggctgg cactatgtcg aagctgccca aatttgagat
541 tgaattacca gctgcgccta agtcaactaa acccagcctt tccgaaagag acatcgcaat
601 ggctaccata tacgggcagc tgtatgttct cttcttgagg catcattctc ggacctccaa
661 cagcacagga gcggaggtgg tcctctatca tctaccacga gaaggtgcct gtaaaaagat
721 gcacatattg aagttaaata ggacgggaaa gtttgccctg aacgtggtgg acaacctggt
781 agtcgtgcat catcaggata cagtgacatc ggtaatattc gatatcaagt tacggggaga
841 gtttgacggc tccgttacct tccaccaccc cgtgcttcct gctcgatcga tccagcccta
901 tcagatcccc atcacaggtc ctgctgccgt gaccagccag tctcctgttc catgtaaact
961 ctattcttca tcttggattg tctttcaacc tgacatcatt atcagcgcaa gccaaggtta
1021 cctctggaac ctccaagtga aacttgagcc catagtaaat ctcttaccag acaaaggaag
1081 actcatggac tttctcctcc agagaaagga atgcaagatg gtcatcctgt ctgtctgttc
1141 acagatgtta agtgagtcag acagagcatc gctgcccgtg atagccactg tttttgataa
1201 actcaaccat gagtataaaa agtacctgga tgccgagcag agttatgcga tggcggtgga
1261 agcagggcag agccgaagca gcccgctcct caagaggccg gtgcggaccc aggcggtgct
1321 ggaccagtca gatgtgtaca cccatgtcct gtcagccttc gtggaaaaga aggagatgcc
1381 tcataaattt gtgatagccg tgctgatgga atacattcgt tctcttaacc agtttcagat
1441 tgcagtacag cattacctac atgaacttgt tatcaaaacc cttgtccagc acaacctctt
1501 ttatatgctg catctgttcc tgcagtacca cgtcctcagc gactccaaac ctttggcttg
1561 tctgctgtta tccctagaga gtttctatcc tcctgctcat cagctatctc tggacatgct
1621 gaagcgactt tcaacagcaa atgatgaaat agtagaagtt ctcctttcca aacaccaagt
1681 gttagctgcc ttaaggttta tccggggcat tggtggccat gacaacattt ctgcacgaaa
1741 atttttagat gctgcaaagc agactgaaga caacatgctt ttctatacaa tattccgctt
1801 ttttgaacag cgaaaccagc gtttgcgagg gagccccaat ttcacaccag gggaacactg
1861 tgaagaacat gttgcttttt tcaaacagat ttttggagac caagctctaa tgaggcctac
1921 aacattctga aatcacttgc tgttttttta tataaaaatg tgtacaaagt taatttattg
1981 cattaataaa gctctttaaa ct
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