LOCUS AK296224 3049 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58536 complete cds, highly similar to
Synaptotagmin-like protein 2.
ACCESSION AK296224
VERSION AK296224.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3049)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3049
/clone="BRTHA2023432"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490848"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 232..2940
/codon_start=1
/note="highly similar to Synaptotagmin-like protein 2"
/protein_id="BAG58947.1"
/transl_table=1
/translation="MSGQWFYEAKAKRHRDKIHGADIIRASMRKKRPQIAAEQSKDRE
NGAKESWVNNVNKDAFLPPELAGVVEEPEEDAAPASPSSSVVNPASSVIDMSQENTRK
PNVSPEKRKNPFNSSKLPEGHSSQQTKNEQSKNGRTGLFQTSKEDELSESKEKSTVAD
TSIQKLEKSKQTLPGLSNGSQIKAPIPKARKMIYKSTDLNKDDNQSFPRQRTDSLKAR
GAPRGILKRNSSSSSTDSETLRYNHNFEPKSKIVSPGLTIHERISEKEHSLEDNSSPN
SLEPLKHVRFSAVKDELPQSPGLIHGREVGEFSVLESDRLKNGMEDAGDTEEFQSDPK
PSQYRKPSLFHQSTSSPYVSKSETHQPMTSGSFPINGLHSHSEVLTARPQSMENSPTI
NEPKDKSSELTRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKT
LERSAARKMPSKSLEDISSDSSNQAKVDNQPEELVRSAEDDEKPDQKPVTNECVPRIS
TVPTQPDNPFSHPDKLKRMSKSVPAFLQDESDDRETDTASESSYQLSRHKKSPSSLTN
LSSSSGMTSLSSVSGSVMSVYSGDFGNLEVKGNIQFAIEYVESLKELHVFVAQCKDLA
AADVKKQRSDPYVKAYLLPDKGKMGKKKTLVVKKTLNPVYNEILRYKIEKQILKTQKL
NLSIWHRDTFKRNSFLGEVELDLETWDWDNKQNKQLRWYPLKRKTAPVALEAENRGEM
KLALQYVPEPVPGKKLPTTGEVHIWVKECLDLPLLRGSHLNSFVKCTILPDTSRKSRQ
KTRAVGKTTNPIFNHTMVYDGFRPEDLMEACVELTVWDHYKLTNQFLGGLRIGFGTGK
SYGTEVDWMDSTSEEVALWEKMVNSPNTWIEATLPLRMLLIAKISK"
BASE COUNT 995 a 661 c 718 g 675 t
ORIGIN
1 agtgccgggc gacacccggg ccgtgccgcc agcgtccgtc gggagagtga aggctcgcaa
61 cgccttgccc gggggaaggt aacgcgccgc gcccggggct gcgcggtttg caccgccagg
121 ccgagggctg ggggccagaa gacaagagag acggcgaggc gcgctccctg cccggcagcg
181 actcggagac atttgcctga aaaaattaag gatgaccagc agctgaagaa tatgagtggc
241 caatggtttt atgaagccaa ggcaaaaagg cacagggaca aaatccatgg cgcagatatc
301 atcagagcat ctatgagaaa gaagaggccc cagatagcag ctgagcagag taaagacaga
361 gaaaatgggg caaaggaaag ctgggtgaat aatgtcaaca aagatgcttt ccttcctcca
421 gagctggctg gcgttgtaga agagccagaa gaggatgcag caccagcaag cccgagttcc
481 agtgtggtaa atccagcttc cagtgtgatt gatatgtccc aggaaaacac aaggaaacca
541 aatgtgtctc cagagaagag gaagaatccg tttaatagct ccaagttgcc agaaggtcac
601 tcgtcacaac aaactaaaaa tgaacagtca aaaaatggaa gaactggttt atttcagact
661 tcaaaagagg atgaattgtc agagtcaaaa gaaaagtcaa ctgtcgcaga tacttcaatc
721 caaaagttag agaaatcaaa gcagactttg ccaggccttt caaatgggtc ccaaatcaag
781 gctccaatcc ccaaagccag gaagatgatc tacaaatcaa ctgatttaaa caaagatgat
841 aaccagtctt ttcctagaca aaggacagac tccctgaaag cgagaggggc tccgagaggg
901 atcctcaagc gcaactccag ttccagtagc acagactcag aaacccttcg ttataatcac
961 aactttgaac ccaaaagcaa aattgtgtca cctggcctaa ccatccatga gagaatttct
1021 gagaaggagc attctttaga agacaactct tccccaaact ccctggagcc attaaagcat
1081 gtgagattct ctgcagtgaa ggatgagctt ccacagagtc ctgggctaat ccatggtcgg
1141 gaagtaggag aatttagtgt tttagaatct gacagattga aaaatggaat ggaagatgca
1201 ggggacacag aagagtttca gagtgaccct aagccttctc aatacagaaa gccttcgctt
1261 tttcatcaat caacctcaag cccatatgta tcaaaaagtg aaacacatca gccaatgact
1321 tctggttctt ttccaattaa tgggctgcat tctcattcag aagttttaac tgcaagacca
1381 cagtctatgg agaattcacc aaccatcaat gaacccaaag ataaatcatc agaattaaca
1441 aggcttgaat ctgtattacc cagaagccct gctgatgaac tgtctcattg tgttgagcct
1501 gagccatctc aggtgccagg tggcagttct agagaccgtc agcaaggttc agaagaagaa
1561 cccagtcctg ttttgaaaac tttggaaagg agtgccgcta ggaaaatgcc ttccaaaagt
1621 ctagaagaca tttcatcaga ttcatcaaat caagcaaaag tagataatca gccagaagaa
1681 ttagtgcgta gtgctgaaga tgatgagaaa ccagatcaga agccagttac aaatgaatgc
1741 gtaccaagaa tttccacagt gcctacacaa cctgataatc cattttctca ccctgacaaa
1801 ctcaaaagga tgagcaagtc tgttccagca tttctccaag atgagagtga tgacagagaa
1861 acagatacag catcagaaag cagttaccag ctcagcagac acaagaagag cccgagctct
1921 ttaaccaatc ttagcagctc ctctggcatg acgtccttgt cttctgtgag tggcagtgtg
1981 atgagtgttt atagtggaga ctttggcaat ctggaagtta aaggaaatat tcagtttgca
2041 attgaatatg tggagtcact gaaggagttg catgtttttg tggcccagtg taaggactta
2101 gcagcagcgg atgtaaaaaa acagcgttca gacccatatg taaaggccta tttgctacca
2161 gacaaaggca aaatgggcaa gaagaaaaca ctcgtagtga agaaaacctt gaatcctgtg
2221 tataacgaaa tactgcggta taaaattgaa aaacaaatct taaagacaca gaaattgaac
2281 ctgtccattt ggcatcggga tacatttaag cgcaatagtt tcctagggga ggtggaactt
2341 gatttggaaa catgggactg ggataacaaa cagaataaac aattgagatg gtaccctctg
2401 aagcggaaga cagcaccagt tgcccttgaa gcagaaaaca gaggtgaaat gaaactagct
2461 ctccagtatg tcccagagcc agtccctggt aaaaagcttc ctacaactgg agaagtgcac
2521 atctgggtga aggaatgcct tgatctacca ctgctaaggg gaagtcatct aaattctttt
2581 gttaaatgta ccatccttcc agatacaagt aggaaaagtc gccagaagac aagagctgta
2641 gggaaaacca ccaaccctat cttcaaccac actatggtgt atgatgggtt caggcctgaa
2701 gatctgatgg aagcctgcgt agagcttact gtctgggacc attacaaatt aaccaaccaa
2761 tttttgggag gtcttcgtat tggctttgga acaggtaaaa gttatgggac tgaagtggac
2821 tggatggact ctacttcaga ggaagttgct ctctgggaga agatggtaaa ctcccccaat
2881 acttggattg aagcaacact gcctctcaga atgcttttga ttgccaagat ttccaaatga
2941 gcccaaattc cactggctcc tccactgaaa actactaaac cggtggaatc tgatcttgaa
3001 aatctgagta ggtggacaaa tatcctcact ttctatctat tgcacctaa
//