LOCUS AK296214 2094 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53343 complete cds, highly similar to Histone
deacetylase 9.
ACCESSION AK296214
VERSION AK296214.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2094)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2094
/clone="BRTHA2021659"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490838"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 88..1737
/codon_start=1
/note="highly similar to Histone deacetylase 9"
/protein_id="BAH12283.1"
/transl_table=1
/translation="MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREK
QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQEL
LEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSAT
KDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPL
RKTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMN
LLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPAS
SSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPG
IRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKS
IEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKE
EPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII"
BASE COUNT 638 a 497 c 473 g 486 t
ORIGIN
1 ggagagagct atagcatcca ctctgtcctt tctgctttgc acacagatgg ggtggctgga
61 cgagagcagc tcttggctca gcaaagaatg cacagtatga tcagctcagt ggatgtgaag
121 tcagaagttc ctgtgggcct ggagcccatc tcacctttag acctaaggac agacctcagg
181 atgatgatgc ccgtggtgga ccctgttgtc cgtgagaagc aattgcagca ggaattactt
241 cttatccagc agcagcaaca aatccagaag cagcttctga tagcagagtt tcagaaacag
301 catgagaact tgacacggca gcaccaggct cagcttcagg agcatatcaa gttgcaacag
361 gaacttctag ccataaaaca gcaacaagaa ctcctagaaa aggagcagaa actggagcag
421 cagaggcaag aacaggaagt agagaggcat cgcagagaac agcagcttcc tcctctcaga
481 ggcaaagata gaggacgaga aagggcagtg gcaagtacag aagtaaagca gaagcttcaa
541 gagttcctac tgagtaaatc agcaacgaaa gacactccaa ctaatggaaa aaatcattcc
601 gtgagccgcc atcccaagct ctggtacacg gctgcccacc acacatcatt ggatcaaagc
661 tctccacccc ttagtggaac atctccatcc tacaagtaca cattaccagg agcacaagat
721 gcaaaggatg atttccccct tcgaaaaact gaatcctcag tcagtagcag ttctccaggc
781 tctggtccca gttcaccaaa caatgggcca actggaagtg ttactgaaaa tgagacttcg
841 gttttgcccc ctacccctca tgccgagcaa atggtttcac agcaacgcat tctaattcat
901 gaagattcca tgaacctgct aagtctttat acctctcctt ctttgcccaa cattaccttg
961 gggcttcccg cagtgccatc ccagctcaat gcttcgaatt cactcaaaga aaagcagaag
1021 tgtgagacgc agacgcttag gcaaggtgtt cctctgcctg ggcagtatgg aggcagcatc
1081 ccggcatctt ccagccaccc tcatgttact ttagagggaa agccacccaa cagcagccac
1141 caggctctcc tgcagcattt attattgaaa gaacaaatgc gacagcaaaa gcttcttgta
1201 gctggtggag ttcccttaca tcctcagtct cccttggcaa caaaagagag aatttcacct
1261 ggcattagag gtacccacaa attgccccgt cacagacccc tgaaccgaac ccagtctgca
1321 cctttgcctc agagcacgtt ggctcagctg gtcattcaac agcaacacca gcaattcttg
1381 gagaagcaga agcaatacca gcagcagatc cacatgaaca aactgctttc gaaatctatt
1441 gaacaactga agcaaccagg cagtcacctt gaggaagcag aggaagagct tcagggggac
1501 caggcgatgc aggaagacag agcgccctct agtggcaaca gcactaggag tgacagcagt
1561 gcttgtgtgg atgacacact gggacaagtt ggggctgtga aggtcaagga ggaaccagtg
1621 gacagcgatg aagatgctca gatccaggaa atggaatctg gggagcaggc tgcttttatg
1681 caacaggtaa taggcaaaga tttagctcca ggatttgtaa ttaaagtcat tatctgaaca
1741 tgaaatgcat tgcaggtttg gtaaatggat atgatttcct atcagtttat atttctctat
1801 gatttgagtt cagtgtttaa ggattctacc taatgcagat atatgtatat atctatatag
1861 aggtctttct atatactgat ctctatatag atatcaatgt ttcattgaaa atccactggt
1921 aaggaaatac ctgttatact aaaattatga tacataatat ctgagcagtt aataggcttt
1981 aaatttatcc caaagcctgc tacaccaatt acttctaaag aaaacaaatt cactgttatt
2041 ttgagtttat gtgttgagat cagtgactgc tggatagtct cccagtctga tcaa
//