LOCUS AK296188 2007 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56630 complete cds, highly similar to Homo
sapiens phospholipase D family, member 4 (PLD4), mRNA.
ACCESSION AK296188
VERSION AK296188.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2007)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2007
/clone="BRTHA2018070"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490812"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 193..1734
/codon_start=1
/note="highly similar to Homo sapiens phospholipase D
family, member 4 (PLD4), mRNA"
/protein_id="BAG58918.1"
/transl_table=1
/translation="MPGCPVQMLKPLWKAAVAPTWPCSMPPRRPWDRQAGTLQVLGAL
AVLWLGSVALICLLWQVPRPPTWGQVQPKDVPRSWEHGSSPAWEPLEAEARQQRDSCQ
LVLVESIPQDLPSAAGSPSAQPLGQAWLQLLDTAQESVHVASYYWSLTGPDIGVNDSS
SQLGEALLQKLQQLLGRNISLAVATSSPTLARTSTDLQVLAARGAHVRQVPMGRLTRG
VLHSKFWVVDGRHIYMGSANMDWRSLTQVKELGAVIYNCSHLAQDLEKTFQTYWVLGV
PKAVLPKTWPQNFSSHFNRFQPFHGLFDGVPTTAYFSASPPALCPQGRTRDLEALLAV
MGSAQEFIYASVMEYFPTTRFSHPPRYWPVLDNALRAAAFGKGVRVRLLVGCGLNTDP
TMFPYLRSLQALSNPAANVSVDVKVFIVPVGNHSNIPFSRVNHSKFMVTEKAAYIGTS
NWSEDYFSSTAGVGLVVTQSPGAQPAGATVQEQLRQLFERDWSSRYAVGLDGQAPGQD
CVWQG"
BASE COUNT 350 a 680 c 631 g 346 t
ORIGIN
1 aggacaaaga ggaagtagct gggaggggaa ggagccagct gcagagagga ggaggtgagc
61 tgcagagaag aggaggttgg tgtggagcac aggcagcacc gagcctgccc cgtgagctga
121 gggcctgcag tctgcggctg gaatcaggat agacactaag gcaggacccc cagagagctg
181 gagctgctgg tgatgccagg ctgccctgtg cagatgctga agcctctttg gaaagcagca
241 gtggccccca catggccatg ctccatgccg ccccgccgcc cgtgggacag acaggctggc
301 acgttgcagg tcctgggagc gctggctgtg ctgtggctgg gctccgtggc tcttatctgc
361 ctcctgtggc aagtgccccg tcctcccacc tggggccagg tgcagcccaa ggacgtgccc
421 aggtcctggg agcatggctc cagcccagct tgggagcccc tggaagcaga ggccaggcag
481 cagagggact cctgccagct tgtccttgtg gaaagcatcc cccaggacct gccatctgca
541 gccggcagcc cctctgccca gcctctgggc caggcctggc tgcagctgct ggacactgcc
601 caggagagcg tccacgtggc ttcatactac tggtccctca cagggcctga catcggggtc
661 aacgactcgt cttcccagct gggagaggct cttctgcaga agctgcagca gctgctgggc
721 aggaacattt ccctggctgt ggccaccagc agcccgacac tggccaggac atccaccgac
781 ctgcaggttc tggctgcccg aggtgcccat gtacgacagg tgcccatggg gcggctcacc
841 aggggtgttt tgcactccaa attctgggtt gtggatggac ggcacatata catgggcagt
901 gccaacatgg actggcggtc tctgacgcag gtgaaggagc ttggcgctgt catctataac
961 tgcagccacc tggcccaaga cctggagaag accttccaga cctactgggt actgggggtg
1021 cccaaggctg tcctccccaa aacctggcct cagaacttct catctcactt caaccgtttc
1081 cagcccttcc acggcctctt tgatggggtg cccaccactg cctacttctc agcgtcgcca
1141 ccagcactct gtccccaggg ccgcacccgg gacctggagg cgctgctggc ggtgatgggg
1201 agcgcccagg agttcatcta tgcctccgtg atggagtatt tccccaccac gcgcttcagc
1261 caccccccga ggtactggcc ggtgctggac aacgcgctgc gggcggcagc cttcggcaag
1321 ggcgtgcgcg tgcgcctgct ggtcggctgc ggactcaaca cggaccccac catgttcccc
1381 tacctgcggt ccctgcaggc gctcagcaac cccgcggcca acgtctctgt ggacgtgaaa
1441 gtcttcatcg tgccggtggg gaaccactcc aacatcccat tcagcagggt gaaccacagc
1501 aagttcatgg tcacggagaa ggcagcctac ataggcacct ccaactggtc ggaggattac
1561 ttcagcagca cggcgggggt gggcttggtg gtcacccaga gccctggcgc gcagcccgcg
1621 ggggccacgg tgcaggagca gctgcggcag ctctttgagc gggactggag ttcgcgctac
1681 gccgtcggcc tggacggaca ggctccgggc caggactgcg tttggcaggg ctgagggggg
1741 cctctttttc tctcggcgac cccgccccgc acgcgccctc ccctctgacc ccggcctggg
1801 cttcagccgc ttcctcccgc aagcagcccg ggtccgcact gcgccaggag ccgcctgcga
1861 ccgcccgggc gtcgcaaacc gcccgcctgc tctctgattt ccgagtccag ccccccctga
1921 gccccacctc ctccagggag ccctccagga agccccttcc ctgactcctg gcccacaggc
1981 caggcctaaa aaaaactcgt ggcttcc
//