LOCUS AK296095 1601 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51481 complete cds, highly similar to Sorting
nexin-11.
ACCESSION AK296095
VERSION AK296095.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1601)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1601
/clone="BRTHA2005051"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490719"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 594..974
/codon_start=1
/note="highly similar to Sorting nexin-11"
/protein_id="BAG58849.1"
/transl_table=1
/translation="MTVSDAILRYAMSNCGWAQEERQSSSHLAKGDQPKSCCFLPRSG
RRSSPSPPPSEEKDHLEVWAPVVDSEVPSLESPTLPPLSSPLCCDFGRPKEGTSTLQS
VRRAVGGDHAVPLDPGQLETVLEK"
BASE COUNT 319 a 414 c 466 g 402 t
ORIGIN
1 attcgccgtc cctcacccgg cacctgcgtg cactctccgg cgtcccaaat gagtggaggg
61 gggatcccga ctccagtccg gggccttggc cagcggagcc gcgctattcg gaagcgggaa
121 gcccactcag agcccgggcc tgtaggggcg gggcgtcccg ggcacccggg attggggcgt
181 ctcccgtcgt gcaccggggc accggcgact cacccggaag gagaagccgt gatctggcta
241 tatggtgggg cgcgggcggt gtcgctgtgg ggagctggtg ctgttctcag accaacagca
301 aagcctttac tgccaagact tcctgtgtgc ggcgccgcta ccgtgagttc gtgtggctga
361 gaaagcagct acagagaaat gctggtttgg tgcctgttcc tgaacttcct gggaagtcaa
421 ccttcttcgg cacctcagat gagttcattg agaagcgacg acaaggtctg cagcacttcc
481 ttgaaaaggt cctgcagagt gtggttctcc tgtcagacag ccagttgcac ctattcctgc
541 aaagccagct ctcggtgcct gagatagaag cctgtgtcca gggccgaagt accatgactg
601 tgtctgatgc cattcttcga tatgctatgt caaactgtgg ctgggcccag gaagagaggc
661 agagctcttc tcacctggct aaaggagacc agcctaagag ttgctgcttt cttccaagat
721 cgggtaggag gagctctccc tcaccgcctc ccagtgaaga aaaggaccat ttagaagtgt
781 gggctccagt tgttgactct gaggttcctt ccttggaaag tcccactctc ccacccctct
841 cctcaccatt atgctgtgat tttggaagac ccaaagaggg aacctccact cttcagtccg
901 tgaggagggc tgtgggagga gatcatgctg tgcctttgga ccctggtcag ttagaaacag
961 ttttggaaaa gtgagctctg ggttctgctc tgagatggtc agagaagatg cgggccagga
1021 gacttactca ggtgggactg ggcacagggc aggtatgtgg gaggctgggc tgcttagtgt
1081 cttctagtca cctctgcttg ggctgattga cagaggtcag tcattacagc cccttatgcc
1141 tcttccatgg gaacaaatac tgtgcagatg tttgtaagtt aaacataaga cacaggggct
1201 gttgcttttg aacagaaccc tatattactc tcctgggatc tgagtttctg caggtcattt
1261 gtatgtagga ccaggagtat ctcctcaggt gaccagtttt ggggacccgt atgtggcaaa
1321 ttctaagctg ccatattgaa catcatccca ctgggagtgg ttatgttgta tccccatctt
1381 ggctggcttc agtttttgct gtagccctag agcactttgt ttgtgggagg ctggcctctt
1441 gcctacctcc ttgcatggac agggggatga atatttactt tcccacctcc ttgctttttc
1501 tttcactgat accactgaat ggaactggtg ctgtgactcc tgctgctggg gatttatgtc
1561 ccgagacctt agcctggctg agtggagcct gagacctgca c
//