LOCUS AK296094 1498 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58140 complete cds, highly similar to Mus
musculus myotubularin related protein 11 (Mtmr11), mRNA.
ACCESSION AK296094
VERSION AK296094.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1498)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1498
/clone="BRTHA2005028"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490718"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 175..1239
/codon_start=1
/note="highly similar to Mus musculus myotubularin
related protein 11 (Mtmr11), mRNA"
/protein_id="BAG58848.1"
/transl_table=1
/translation="MPEPRSRQPSSCLASRCLPGEQILAWAPGVRKGLEPELSGTLIC
TNFRVTFQPCGWQWNQDTPLNSEYDFALVNIGRLEAVSGLSRVQLLRPGSLHKFIPEE
ILIHGRDFRLLRVGFEAGGLEPQAFQVTMAIVQARAQSNQAQQYSGITLSKAGQGSGS
RKPPIPLMETAEDWETERKKQAARGWRVSTVNERFDVATSLPRYFWVPNRILDSEVRR
AFGHFHQGRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVELMLQAGHSDVVLVD
TMDELPSLADVQLAHLRLRALCLPDSSVAEDKWLSALEGTRWLDYVRACLRKASDISV
LVTSRVRSVILQGSGVSPLP"
BASE COUNT 314 a 388 c 422 g 374 t
ORIGIN
1 actgtttacc agccctgtta ggtctggagc tccccacaga cactgatctc agtttccccc
61 gagagtgtga gtgtaggcct ctacaggcag ctgcctctgg ggagttgggg agcctagggg
121 ttaactctag acccccctca accctctgga ccaaagtctg tccaggaaaa taggatgccg
181 gagcccagga gtcgtcagcc tagcagttgc ctggcctcca gatgcctccc aggggagcag
241 atcctagcat gggccccagg ggtgaggaag ggcctggaac cagaattgtc tggaaccctg
301 atctgtacca actttagggt caccttccag ccctgtggat ggcagtggaa tcaggacact
361 cccttgaaca gtgaatacga ttttgccctg gtcaacattg gacgattaga ggctgtgagc
421 ggcttgtccc gagtccagct cctccgtcca gggtccctgc ataaatttat ccctgaggag
481 attctgattc atggccgaga cttccggctg ctcagagttg gttttgaggc tggaggccta
541 gagcctcagg cttttcaggt gaccatggcc attgtccaag ccagagctca gagcaatcaa
601 gcccaacagt attcggggat aaccctgagc aaggctggcc agggttctgg ctccagaaaa
661 ccaccaattc ctctcatgga gacagcggaa gactgggaga ctgagcggaa gaagcaggca
721 gccagaggct ggagggtcag cacggtcaac gagaggttcg acgtagccac cagcctcccc
781 cgttacttct gggtccctaa ccgaattctg gacagtgagg tcaggagagc atttggccac
841 tttcatcagg gccgtggacc gcgcttgtcc tggcatcacc ctgggggcag tgatcttctc
901 cgctgtggag gcttctatac agccagtgac cctaacaagg aggatatcag agcagtggag
961 ttgatgctcc aggctgggca ttcagatgtt gtcctggtag acactatgga tgagctgccc
1021 agccttgcag atgtccaact tgcccacctg aggctgaggg ccctctgcct gcctgattca
1081 tctgtagctg aggataaatg gctttcagcc ctggaaggaa cacgatggct ggactatgtc
1141 agggcttgtc ttcgaaaggc cagtgacatt tcagtattag tgacatccag ggttcgttct
1201 gtaatacttc aaggctccgg tgtttctcct cttccttgat tgtgtctggc agctcctcca
1261 gcagtttcca gctgattttg aattctctga gtttttcctt cttgctcttc atgacagtgt
1321 cagggttcct gacaccctta ccttcctgag aaataccccc tgggagcgcg gaaagcagag
1381 cggacaggtc agtgacttct atttttgact cgtgtttttt tttttccatt gagatgtact
1441 ctctgaagtt tggtcttgat ttgttttatg agaagtgagg tctgtgagtg gggagggg
//