LOCUS AK296092 1167 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58065 complete cds, highly similar to LIM and
SH3 domain protein 1.
ACCESSION AK296092
VERSION AK296092.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1167)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1167
/clone="BRTHA2004878"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490716"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 130..792
/codon_start=1
/note="highly similar to LIM and SH3 domain protein 1"
/protein_id="BAG58846.1"
/transl_table=1
/translation="MNPNCARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNY
KGYEKKPYCNAHYPKQSFTMVADTPENLRLKQQSELQSQVRYKEEFEKNKGKGFSVVA
DTPELQRIKKTQDQISNVSSCPALRHPCCPLFGPLPASLADASLADVNEASASTTPAL
QGGPGEELGVPRCLFSVYPQTTSTHSIFFLKGLYSVGACVLNQPPLSLTVVLFSGYRG
YR"
BASE COUNT 234 a 376 c 317 g 240 t
ORIGIN
1 agttccccag ctccagccgc cgtcgctgct gcctgtgtag ttgcagccgc ggccgcctcc
61 cgccagctcg cctcggggaa caggacgcgc gtgagctcag gcgtccccgc cccagctttt
121 ctcggaacca tgaaccccaa ctgcgcccgg tgcggcaaga tcgtgtatcc cacggagaag
181 gtgaactgtc tggataagtt ctggcataaa gcatgcttcc attgcgagac ctgcaagatg
241 acactgaaca tgaagaacta caagggctac gagaagaagc cctactgcaa cgcacactac
301 cccaagcagt ccttcaccat ggtggcggac accccggaaa accttcgcct caagcaacag
361 agtgagctcc agagtcaggt gcgctacaag gaggagtttg agaagaacaa gggcaaaggt
421 ttcagcgtag tggcagacac gcccgagctc cagagaatca agaagaccca ggaccagatc
481 agtaacgtga gctcttgccc tgccctgcgg catccctgct gccctctgtt tggtcccctt
541 cctgccagcc tggcagacgc aagcctggca gatgtgaatg aggccagtgc ctccactacc
601 cctgccctcc agggtgggcc tggggaagag cttggggttc ccagatgcct cttctctgtg
661 tacccccaga ccaccagcac gcatagcatt ttcttcttga agggactgta ttctgtgggg
721 gcctgtgtgc taaatcagcc cccactctct ctgactgttg ttcttttttc tggatatcgt
781 gggtatcggt aaagactgca tgtctcatct tagcacaaag gtcaaaactg gggggcgggg
841 agcacctggc ctcccctggt ctgcgcctgg gtgctgacat tgcagtcatt tccgcccttc
901 cttggcctcc tcccccacat cagcctgctc ttccttcctg tgtaaaaacc ccagccagct
961 tcacccgcca gccctgcacc ccctggctca caccccccgc ctccctgatg gtcagtggca
1021 tctggctgtg gcaggggtgg gcatggagag tgggcagggg atcaactgtc cccagcatcg
1081 tgtgccctcc atggcacctg tggccagaga acaggcctca gtttcctgct tggcagagcc
1141 acaggcaagc agcctgtgtg gctttag
//