LOCUS AK296090 1902 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53342 complete cds, highly similar to
Granulins precursor.
ACCESSION AK296090
VERSION AK296090.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1902)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1902
/clone="BRTHA2004500"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490714"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 184..1776
/codon_start=1
/note="highly similar to Granulins precursor"
/protein_id="BAG58844.1"
/transl_table=1
/translation="MAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSA
DGRSCFQRSGNNSVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCC
PHGAFCDLVHTRCITPTGTHPLAKKLPAQRTNRAVALSSSVMCPDARSRCPDGSTCCE
LPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTVGD
VKCDMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGP
HQVPWMEKAPAHLSLPDPQALKRDVPCGNVSSCPSSDTCCQLTSGEWGCCPIPEAVCC
SDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGCDQHTSCPVGQT
CCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSCEKEVVSAQPATFLARSPH
VGVKDVECGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAARGTK
CLRREAPRWDAPLRDPALRQLL"
BASE COUNT 327 a 630 c 575 g 370 t
ORIGIN
1 gctgctgccc aaggaccgcg gagtcggacg caggcagacc atgtggaccc tggtgagctg
61 ggtggcctta acagcagggc tggtggctgg aacgcggtgc ccagatggtc agttctgccc
121 tgtggcctgc tgcctggacc ccggaggagc cagctacagc tgctgccgtc cccttctgga
181 caaatggccc actgctctgc cggccactcc tgcatcttta ccgtctcagg gacttccagt
241 tgctgcccct tcccagaggc cgtggcatgc ggggatggcc atcactgctg cccacggggc
301 ttccactgca gtgcagacgg gcgatcctgc ttccaaagat caggtaacaa ctccgtgggt
361 gccatccagt gccctgatag tcagttcgaa tgcccggact tctccacgtg ctgtgttatg
421 gtcgatggct cctgggggtg ctgccccatg ccccaggctt cctgctgtga agacagggtg
481 cactgctgtc cgcacggtgc cttctgcgac ctggttcaca cccgctgcat cacacccacg
541 ggcacccacc ccctggcaaa gaagctccct gcccagagga ctaacagggc agtggccttg
601 tccagctcgg tcatgtgtcc ggacgcacgg tcccggtgcc ctgatggttc tacctgctgt
661 gagctgccca gtgggaagta tggctgctgc ccaatgccca acgccacctg ctgctccgat
721 cacctgcact gctgccccca agacactgtg tgtgacctga tccagagtaa gtgcctctcc
781 aaggagaacg ctaccacgga cctcctcact aagctgcctg cgcacacagt gggggatgtg
841 aaatgtgaca tggaggtgag ctgcccagat ggctatacct gctgccgtct acagtcgggg
901 gcctggggct gctgcccttt tacccaggct gtgtgctgtg aggaccacat acactgctgt
961 cccgcggggt ttacgtgtga cacgcagaag ggtacctgtg aacaggggcc ccaccaggtg
1021 ccctggatgg agaaggcccc agctcacctc agcctgccag acccacaagc cttgaagaga
1081 gatgtcccct gtggtaatgt cagcagctgt ccctcctccg atacctgctg ccaactcacg
1141 tctggggagt ggggctgctg tccaatccca gaggctgtct gctgctcgga ccaccagcac
1201 tgctgccccc agggctacac gtgtgtagct gaggggcagt gtcagcgagg aagcgagatc
1261 gtggctggac tggagaagat gcctgcccgc cgggcttcct tatcccaccc cagagacatc
1321 ggctgtgacc agcacaccag ctgcccggtg gggcagacct gctgcccgag cctgggtggg
1381 agctgggcct gctgccagtt gccccatgct gtgtgctgcg aggatcgcca gcactgctgc
1441 ccggctggct acacctgcaa cgtgaaggct cgatcctgcg agaaggaagt ggtctctgcc
1501 cagcctgcca ccttcctggc ccgtagccct cacgtgggtg tgaaggacgt ggagtgtggg
1561 gaaggacact tctgccatga taaccagacc tgctgccgag acaaccgaca gggctgggcc
1621 tgctgtccct accgccaggg cgtctgttgt gctgatcggc gccactgctg tcctgctggc
1681 ttccgctgcg cagccagggg taccaagtgt ttgcgcaggg aggccccgcg ctgggacgcc
1741 cctttgaggg acccagcctt gagacagctg ctgtgaggga cagtactgaa gactctgcag
1801 ccctcgggac cccactcgga gggtgccctc tgctcaggcc tccctagcac ctccccctaa
1861 ccaaattctc cctggacccc attctgagct ccccatcacc at
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