LOCUS AK296071 1939 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58576 complete cds.
ACCESSION AK296071
VERSION AK296071.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1939)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1939
/clone="BRTHA2001482"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000490695"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 115..1842
/codon_start=1
/protein_id="BAG58829.1"
/transl_table=1
/translation="MSSDEEKYSLPVVQNDSSRGSSVSSNLQEEYEELLRYAIVTPNI
EPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETATEVGKGCDFHISSHSKTD
ESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEILVSDFLVSDENLQKME
NVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLKQLCNQINELKELQ
KTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQDVYEGKLADQYY
QRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAMLSGALENAK
AEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKKEEYGPGV
QGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVH
VPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAI
MGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLT
SVHSIKVVD"
BASE COUNT 598 a 402 c 428 g 511 t
ORIGIN
1 agcggttgtg cttgctgagg ctgcacttgc tgacactgca gctgcgacgc ggctaagagg
61 cgcagagcga ggagtcggga tttggtcgcg agcggcgacg agcatttgtg cagaatgtca
121 tcagatgagg agaaatactc acttccagtt gtgcaaaatg actccagtcg aggcagttct
181 gtctcttcga atcttcagga agaatatgaa gaactgcttc gttatgctat agtgactcca
241 aatattgaac cctgtgcttc acagtcatct catcctaagg gagaattggt gccagatgtc
301 agaatttcta caattcatga tattcttcat agtcaaggaa ataactctga agtaagagaa
361 actgcaacag aagttggaaa aggatgtgat ttccatattt caagtcattc aaagacagat
421 gagtcatcac cagtgttatc gccaaggaag ccttctcacc cagtcatgga ttttttcagt
481 tcacatcttt tagctgactc ttcctcacca gcaacaaatt ctagtcatac agatgcccat
541 gaaatacttg tgagcgattt tcttgtttct gatgaaaacc ttcagaagat ggaaaatgtg
601 cttgatcttt ggagttcagg tcttaagaca aacatcatat ctgaactaag taaatggaga
661 cttaatttta ttgactggca ccgaatggaa atgagaaaag agaaagaaaa acatgcagca
721 catttaaaac aactgtgtaa tcagatcaat gaattgaagg agctgcaaaa aacctttgaa
781 atctccattg ggagaaaaga tgaggtgatt tctagcttgt ctcatgccat aggcaagcaa
841 aaggaaaaga tagagttgat gagaacattc ttccactggc gaatcggcca tgtcagagcc
901 agacaggatg tttatgaagg taaactagct gaccagtact accagagaac tttactgaag
961 aaagtctgga aagtctggcg ttccgtagtg caaaagcagt ggaaagatgt ggtagaaaga
1021 gcttgtcaag caagagctga agaagtttgt atccagattt ccaatgatta tgaagccaaa
1081 gttgctatgt tatctggagc tttggaaaat gcaaaagctg agattcaaag aatgcaacat
1141 gaaaaagagc actttgaaga ttccatgaaa aaagctttca tgaggggtgt atgtgcatta
1201 aatcttgaag ccatgactat atttcaaaac agaaatgatg cagggataga ctccacaaat
1261 aataaaaagg aagagtatgg tcctggtgtt caaggaaaag aacattctgc tcatttggat
1321 ccttcagctc ctccgatgcc cttaccagtt acatcaccac tgctgccatc cccaccagcc
1381 gccgtcggag gagccagcgc gactgccgtt ccctcagctg cttcgatgac ttctaccagg
1441 gctgcttccg catcttctgt tcacgttcct gtctctgctc ttggtgcagg atctgcagct
1501 actgctgcat cagaagaaat gtatgtgcca agagttgtaa cctctgcaca acagaaagca
1561 ggaagaacta ttacagcccg gatcacagga agatgtgatt ttgcttcaaa aaatagaatt
1621 agcagcagtt tagctataat gggagtttct cctcccatga gctcagttgt tgtggaaaaa
1681 catcatccag tcacagtgca aaccattcct caagcaactg cagcaaaata tccccggacc
1741 attcatcctg aaagtagtac ctcagcttcc agatcacttg gaaccagatc agctcacacc
1801 cagtctctca caagtgttca ttccataaaa gtggttgact aaagtgaata tgtccatagt
1861 ggggtctttt aatccctctg gtcttaccaa gggttagaag tcttttggtt ttaacttttc
1921 catattgtta gaacatcat
//