LOCUS AK296048 1460 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56814 complete cds.
ACCESSION AK296048
VERSION AK296048.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1460)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1460
/clone="BRSTN2017173"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000490672"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 13..1329
/codon_start=1
/protein_id="BAG58812.1"
/transl_table=1
/translation="MLATLARVAALRRTCLFSGRGGGRGLWTGRPQSDMNNIKPLEGV
KILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRN
KKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSI
TGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIMA
GLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKT
KDGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEEL
TSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSK
FKMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVVDQHETH"
BASE COUNT 411 a 310 c 379 g 360 t
ORIGIN
1 gagacgcacg cgatgctggc gacgctggcg agggtggcag ctctgcgcag aacctgcctc
61 ttctccggcc ggggcggcgg gagggggctg tggactggcc gcccgcagtc agatatgaac
121 aatataaagc cattggaagg ggtaaaaatt ctggatctaa caagagtcct ggcgggacct
181 tttgctacta tgaatttagg agatcttgga gcagaagtta taaaagtgga gagaccagga
241 gctggtgatg atacacgaac ttgggggcca ccttttgttg ggacagaaag tacatattat
301 ctcagtgtta accgaaataa aaaaagtatt gctgttaata tcaaggatcc aaaaggggtg
361 aaaatcatca aagagcttgc agctgtttgt gatgtgtttg tggaaaacta tgtccctggc
421 aaactgtctg caatgggcct gggatatgaa gatatagacg agattgctcc tcacatcatc
481 tattgttcca tcacagggta tggtcagaca ggtccaattt ctcagcgagc tggttatgat
541 gctgttgcct cggctgtttc tggtctgatg cacatcacag ggcctgagaa tggagatcca
601 gttcgcccag gagtagctat gactgatctt gccactggcc tgtatgcata tggagctatt
661 atggctggat tgatacaaaa atacaaaact gggaaaggac tgttcattga ttgtaaccta
721 ctgtcatccc aggtggcgtg tttgtctcac atagctgcaa attatcttat tggtcaaaag
781 gaagcaaaac gttggggtac agctcatggc agtatcgttc cttaccaggc ttttaaaacc
841 aaggatggct atattgtagt tggagcagga aataaccagc agtttgccac cgtctgcaag
901 atcttggatt tgcctgagtt gattgataat tccaagtata aaactaacca ccttcgggta
961 cacaatagaa aagagcttat taaaatatta tctgaacggt ttgaagaaga actgaccagc
1021 aagtggttat atctttttga aggcagtgga gtcccgtatg gcccaatcaa caacatgaag
1081 aatgtatttg cagaacctca ggtattacac aatggcctcg ttatggagat ggagcatcca
1141 actgtgggga agatttccgt cccaggccca gctgtgagat acagtaagtt caagatgtca
1201 gaggccaggc cgcccccgct gctcgggcag cacacaacgc acatcctgaa ggaggtcctg
1261 agatacgatg acagggccat cggggagctg ctcagcgctg gagtggtgga ccaacatgaa
1321 actcactgac aaaggaagag ggctcttcct cataacctcg atccgaatac actggcaaag
1381 gcaacacttt gcttggaccc ttctccccag ttctgatacc actaaaaaga agatttagag
1441 taactccaga tttcttacat
//