LOCUS AK296014 924 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55076 complete cds, highly similar to Core
histone macro-H2A.1.
ACCESSION AK296014
VERSION AK296014.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 924)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..924
/clone="BRSTN2007932"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000490638"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 202..804
/codon_start=1
/note="highly similar to Core histone macro-H2A.1"
/protein_id="BAG58785.1"
/transl_table=1
/translation="MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVG
APVYMAAVLEYLTGNTLEKKGGKEFVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVI
HCNSPVWGADKCEELLEKTVKNCLALADDKKLKSIAFPSIGSGRNGFPKQTAAQLILK
AISSYFVSTMSSSIKTVYFVLFDSESIGIYVQEMAKLDAN"
BASE COUNT 227 a 245 c 282 g 170 t
ORIGIN
1 agttcactcg gcagcggcgc cgggcggagg gggagagcgc gggccgcgcg ggcgggaagc
61 gaagaggcgg gcgggccagc gaggagcgcg gagagaaaag gcgcgagcgg ccaggagggc
121 tcaggccgag acaccttgca gctgccgccg ccgccaccga gccgccgctg tgctcactga
181 tccgcctcca gggccaccgc catgtcgagc cgcggtggga agaagaagtc caccaagacg
241 tccaggtctg ccaaagcagg agtcatcttt cccgtggggc ggatgctgcg gtacatcaag
301 aaaggccacc ccaagtacag gattggagtg ggggcacccg tgtacatggc cgccgtcctg
361 gaatacctga caggaaacac gctggagaag aaaggtggca aggagtttgt ggaagctgtc
421 ctggaactcc ggaaaaagaa cgggcccttg gaagtagctg gagctgctgt cagcgcaggc
481 catggcctgc ctgccaagtt tgtgatccac tgtaatagtc cagtttgggg tgcagacaag
541 tgtgaagaac ttctggaaaa gacagtgaaa aactgcttgg ccctggctga tgataagaag
601 ctgaaatcca ttgcatttcc atccatcggc agcggcagga acggttttcc aaagcagaca
661 gcagctcagc tgattctgaa ggccatctcc agttacttcg tgtctacaat gtcctcttcc
721 atcaaaacgg tgtacttcgt gctttttgac agcgagagta taggcatcta tgtgcaggaa
781 atggccaagc tggacgccaa ctaggctgag caatgacaga accagctgca ccatgtaccc
841 caccttcagt ttaaaagaaa aaaaaaatcc ccttcactcc tactgggagg tgggacccct
901 ttcattttca gttttgctca tcta
//