LOCUS AK295998 1814 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61293 complete cds, highly similar to
Bestrophin-1.
ACCESSION AK295998
VERSION AK295998.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1814)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1814
/clone="BRSTN2003707"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000490622"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 107..1684
/codon_start=1
/note="highly similar to Bestrophin-1"
/protein_id="BAH12234.1"
/transl_table=1
/translation="MFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPD
RLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQAGF
MTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQ
CGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTF
LQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDM
YWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAGIIGRFL
GLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKAVDA
FKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHSVTGIDTKDKSLKTVSSGAK
KSFELLSESDGALMEHPEVSQVRRKTVEFNLTDMPEIPENHLKEPLEQSPTNIHTTLK
DHMDPYWALENRDEAHS"
BASE COUNT 444 a 541 c 461 g 368 t
ORIGIN
1 aacagagtcc cagggagtcc caccagccta gtcgccagac cttctgtggg atcatcggac
61 ccacctggaa ccccacctgc tggccctcac ggaagaacaa cagctgatgt ttgagaaact
121 gactctgtat tgcgacagct acatccagct catccccatt tccttcgtgc tgggcttcta
181 cgtgacgctg gtcgtgaccc gctggtggaa ccagtacgag aacctgccgt ggcccgaccg
241 cctcatgagc ctggtgtcgg gcttcgtcga aggcaaggac gagcaaggcc ggctgctgcg
301 gcgcacgctc atccgctacg ccaacctggg caacgtgctc atcctgcgca gcgtcagcac
361 cgcagtctac aagcgcttcc ccagcgccca gcacctggtg caagcaggct ttatgactcc
421 ggcagaacac aagcagttgg agaaactgag cctaccacac aacatgttct gggtgccctg
481 ggtgtggttt gccaacctgt caatgaaggc gtggcttgga ggtcgaatcc gggaccctat
541 cctgctccag agcctgctga acgagatgaa caccttgcgt actcagtgtg gacacctgta
601 tgcctacgac tggattagta tcccactggt gtatacacag gtggtgactg tggcggtgta
661 cagcttcttc ctgacttgtc tagttgggcg gcagtttctg aacccagcca aggcctaccc
721 tggccatgag ctggacctcg ttgtgcccgt cttcacgttc ctgcagttct tcttctatgt
781 tggctggctg aaggtggcag agcagctcat caaccccttt ggagaggatg atgatgattt
841 tgagaccaac tggattgtcg acaggaattt gcaggtgtcc ctgttggctg tggatgagat
901 gcaccaggac ctgcctcgga tggagccgga catgtactgg aataagcccg agccacagcc
961 cccctacaca gctgcttccg cccagttccg tcgagcctcc tttatgggct ccaccttcaa
1021 catcagcctg aacaaagagg agatggagtt ccagcccaat caggaggacg aggaggatgc
1081 tcacgctggc atcattggcc gcttcctagg cctgcagtcc catgatcacc atcctcccag
1141 ggcaaactca aggaccaaac tactgtggcc caagagggaa tcccttctcc acgagggcct
1201 gcccaaaaac cacaaggcag ccaaacagaa cgttaggggc caggaagaca acaaggcctg
1261 gaagcttaag gctgtggacg ccttcaagtc tgccccacta tatcagaggc caggctacta
1321 cagtgcccca cagacgcccc tcagccccac tcccatgttc ttccccctag aaccatcagc
1381 gccgtcaaag cttcacagtg tcacaggcat agacaccaaa gacaaaagct taaagactgt
1441 gagttctggg gccaagaaaa gttttgaatt gctctcagag agcgatgggg ccttgatgga
1501 gcacccagaa gtatctcaag tgaggaggaa aactgtggag tttaacctga cggatatgcc
1561 agagatcccc gaaaatcacc tcaaagaacc tttggaacaa tcaccaacca acatacacac
1621 tacactcaaa gatcacatgg atccttattg ggccttggaa aacagggatg aagcacattc
1681 ctaacctgct tcctaatggg gatgcttcgc cagccaggtc ctcacctgtg tgtacaccag
1741 caggacactg atccagtcac agccatacag ctgtccacac tgaagaacat gtcctacaac
1801 agcctgaatc aaat
//