LOCUS AK295988 1653 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54689 complete cds, highly similar to Homo
sapiens E2a-Pbx1-associated protein (EB-1), transcript variant 2,
mRNA.
ACCESSION AK295988
VERSION AK295988.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1653)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1653
/clone="BRSTN1000003"
/clone_lib="BRSTN1"
/db_xref="H-InvDB:HIT000490612"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 445..1314
/codon_start=1
/note="highly similar to Homo sapiens E2a-Pbx1-associated
protein (EB-1), transcript variant 2, mRNA"
/protein_id="BAG58763.1"
/transl_table=1
/translation="MQGDARRRRNENYFDDIPRSKLERQMAQSSVCEIWTNQNAGFPF
SAIHQVHNTGDWGEPSITLRPPNEATASTPIQYWQHHPEKLIFQSCDYKAFYLGSMLI
KELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEI
RNISCAAQDPEDLSTSAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQL
ALQARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVIDPSEQKTLANLPWIVEPGQEA
KRGINTKYETTIF"
BASE COUNT 412 a 486 c 389 g 366 t
ORIGIN
1 agctcgcggg gagagcccgg cgctcagcgc agcgcggcgc ggccaagctc cgcgcctctc
61 ccgcccttcc tcggcgcgct cgccctcgcc tcgccgctcg cattcgctgg gggcgcccag
121 aaagatgcac agaggcaacg gctaggggag cggaggttca agccacatgt ctgcgtcctc
181 gggggccaga gcccgccagc cctcgcggat cccggctcgc ggccagcccg agcggctcgg
241 gttttaaaaa tcaatttgat tggccacagg aaacgtattt tggcatctct gggagacagg
301 ctgcacgacg atcccccaca gaagccccct cggtccatca ccctcaggga acccagtggt
361 aatcacactc ctcctcagtt gtctccatca cttagccaaa gcacttacac cactggtggc
421 tccctagacg ttcctcacat tatcatgcag ggcgatgcaa ggaggagaag aaatgaaaac
481 tactttgatg atattccccg atcaaaactg gagaggcaga tggctcagtc gtctgtctgt
541 gaaatatgga cgaatcagaa cgcaggattt cctttctcag cgatccatca ggttcataat
601 acaggagact ggggagaacc ttccattacc ttgcgacctc cgaatgaagc cacagcctct
661 accccgatac agtactggca gcatcaccca gaaaagctta tcttccagtc gtgtgattac
721 aaagcttttt atttaggttc tatgctgata aaagagctta gggggacaga atcaacccaa
781 gatgcttgtg caaaaatgcg ggctaactgt cagaagtcta cagagcaaat gaagaaggtc
841 cctactatta ttctttctgt ctcatataaa ggagtcaaat ttattgatgc aacaaataag
901 aacataattg ctgagcatga aattcgtaat atctcctgtg ctgcccagga cccagaagac
961 ctctcaacat ctgcctatat cacaaaagat ttgaagtcta atcaccacta ctgtcatgtg
1021 tttactgcct ttgatgtgaa tttagcctat gaaatcatcc taaccctggg acaggcattc
1081 gaagtcgctt accagctagc actacaagca agaaaagggg gacactcctc cacactccca
1141 gaaagctttg aaaacaaacc ctccaaaccc atccccaagc cccgcgttag cattcgcaag
1201 tccgtgatcg acccatctga gcaaaagact ctggccaatc taccgtggat tgtggagccg
1261 ggccaagaag ccaagagggg cattaatacc aagtatgaaa ccacgatttt ctgatactcg
1321 ccgtcctcct gtcctcgcgg tgccttgccc gccaagcggt cccggagcag gctttccttc
1381 gcgcctccgc gtccacccag cccaggagga agactgctct gagcgtgcgg ccttgttacg
1441 ggcgaaaggc cactggccat tcctggggaa gttctttctg caccagtgat ggaaaacgca
1501 agactttcca gtcgcaaccc ctgagaggcg tgagttgaga tgggttttcc ctgatgctcc
1561 cgactcccct ccccaccacc tcccaaggta tttctgatga ctccgcccca gtacttgctt
1621 tgcttcattt ggggaaaata ataccttttc ttt
//