LOCUS AK295987 2374 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55978 complete cds, highly similar to
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
precursor (EC 1.6.5.3).
ACCESSION AK295987
VERSION AK295987.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2374)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2374
/clone="BRSSN2019159"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000490611"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 62..2287
/codon_start=1
/note="highly similar to NADH-ubiquinone oxidoreductase
75 kDa subunit, mitochondrial precursor (EC 1.6.5.3)"
/protein_id="BAG58762.1"
/transl_table=1
/translation="MRIRGSSGTLSRINMLRIPVRKALVGLSKSPKGCVRTTATAASN
LIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKV
VAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMF
GNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDM
QVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSNIV
VSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWE
DALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRVDSDTLCTEEVFPTAGAG
TDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPV
DLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVS
SIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKVLFLLGADG
GCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAV
TPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQA
NELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQAVEEPSI
C"
BASE COUNT 676 a 466 c 608 g 624 t
ORIGIN
1 gagagccggc agatgggggg cttttagcca cggtctctgg tctgatgaag cagaaaagaa
61 gatgaggatc agggggtcct cgggaacgct gtcacgaatc aatatgttaa ggatacctgt
121 aagaaaggcc ttagtaggcc tttctaagtc tcctaaagga tgtgttcgaa caactgccac
181 agcagcaagc aacttgattg aagtatttgt tgatggtcag tctgtcatgg tggaaccggg
241 aacgaccgtc ctccaagctt gtgagaaggt tggcatgcag atccctcgat tctgttatca
301 tgaaaggttg tctgttgctg gaaactgcag gatgtgcctt gttgaaattg agaaagcccc
361 taaggttgta gctgcttgtg ccatgccagt aatgaagggt tggaatatcc taacaaactc
421 agaaaaatcc aaaaaagcca gggaaggtgt gatggagttc ttattagcaa atcacccatt
481 ggactgtcct atttgtgacc agggaggtga atgtgatctg caggaccagt ccatgatgtt
541 tggaaatgat aggagccgat ttttagaggg gaagcgtgct gtggaagaca agaacattgg
601 gccattggta aagaccatca tgacaagatg tatacagtgt actcgctgca tcaggtttgc
661 aagtgagatt gcaggagtag atgatttggg aacaacaggc agaggaaatg atatgcaagt
721 tggcacatac attgaaaaga tgttcatgtc tgaactgtct gggaatatca ttgatatctg
781 ccctgtaggt gccctaacct ctaagcccta tgcctttact gcccggcctt gggaaacaag
841 aaagacagaa tccattgatg taatggatgc ggttggaagt aatattgtgg ttagcacaag
901 aactggagaa gtgatgagga ttttgccacg tatgcatgag gacatcaatg aagagtggat
961 ctctgataaa accagatttg cctatgatgg gctaaaacgt caaagactta ccgagccaat
1021 ggtcagaaat gaaaaagggc ttttaaccta tacttcttgg gaggatgcgc tctctcgcgt
1081 agctggaatg ttgcagagtt ttcaaggcaa agatgtggca gcaattgcag gtggcttggt
1141 ggatgctgaa gccctggtag ctctcaaaga tttgcttaat agagtggact ctgacacctt
1201 atgcactgaa gaggtcttcc ccactgcagg agctggcaca gatttgcgtt ccaattatct
1261 tcttaatact acaattgctg gtgtggaaga ggcagatgtt gttcttctgg ttggtacaaa
1321 cccacgtttt gaggcaccac tgtttaatgc tagaattcga aagagctggc tgcataatga
1381 cttaaaagtg gcccttatag gcagtccagt ggacctcact tacacatatg accacctggg
1441 agactccccc aaaattcttc aagacattgc ttcgggaagc catccattta gccaggtcct
1501 aaaggaagct aaaaaaccaa tggtggtttt aggcagttct gcactccaaa gaaatgatgg
1561 agcagcaatt cttgcagctg tttctagcat tgcacaaaag attcggatga ctagtggtgt
1621 tactggtgat tggaaagtta tgaatatcct tcataggatt gcaagtcaag tagctgcttt
1681 ggaccttggc tataagcctg gggtggaagc aattcggaag aaccctccca aggtgctgtt
1741 tctcctggga gcagatggag gttgtatcac acgacaggat ttgccaaagg attgtttcat
1801 tatttatcaa ggacatcatg gtgatgttgg ggctcccata gctgatgtta ttctcccagg
1861 agctgcttac acagagaagt ctgctacata tgtcaacact gagggtagag ctcagcagac
1921 taaggtagca gtgacacctc ctggcttggc aagagaagac tggaaaatta taagagcact
1981 ctctgagatt gctggaatga ctcttccata tgatactctg gatcaagtaa ggaacagatt
2041 ggaagaagtc tctcctaatc ttgttcgata tgatgatatt gaaggggcta attacttcca
2101 gcaagcaaat gagctctcaa agctagtgaa ccagcagctt cttgctgacc cacttgttcc
2161 acctcagcta actataaaag acttctacat gacagattca attagcagag cctcacagac
2221 aatggccaaa tgtgtcaaag ctgtcacaga gggtgcccag gcagtagagg aaccatccat
2281 atgctgaagc ttctactagg atcccagttt tgccgcagat aattaatgga caactgtagt
2341 gcagtgatcc tttacaggtt tatttctttg ttat
//