LOCUS AK295960 1118 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60585 complete cds, highly similar to Mus
musculus DEP domain containing 7 (Depdc7), mRNA.
ACCESSION AK295960
VERSION AK295960.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1118)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1118
/clone="BRSSN2013154"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000490584"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 46..669
/codon_start=1
/note="highly similar to Mus musculus DEP domain
containing 7 (Depdc7), mRNA"
/protein_id="BAG58740.1"
/transl_table=1
/translation="MATVQEKAAALNLSALHSPAHRPPGFSVAQKPFGATYVWSSIIN
TLQTQVEVKKRRHRLKRHNDCFVGSEAVDVIFSHLIQNKYFGDVDIPRAKVVRVCQAL
MDYKVFEAVPTKVFGKDKKPTFEDSSCSLYRFTTIPNQDSQLGKENKLYSPARYADAL
FKSSDIRSASLEDLWGNLSLKPANSPHVNISATLSPQGKLRMKQSKK"
BASE COUNT 350 a 217 c 226 g 325 t
ORIGIN
1 agctgtgaag ctgctggagg agttggcgtc cggggagcaa gggccatggc caccgtgcag
61 gagaaggctg ctgcgctgaa cctctcggct ctccacagcc ccgcgcacag gcctccgggt
121 ttcagtgtag ctcagaagcc atttggagcc acgtatgtat ggagcagcat cataaacact
181 cttcaaacac aagtggaagt gaaaaaacga aggcaccgtt taaaacgaca taatgactgc
241 tttgttggtt cagaagctgt ggatgtcatt ttttctcacc taattcagaa taagtatttt
301 ggtgatgtag atattcctcg agccaaagtg gtgagagtgt gtcaagcgct tatggactac
361 aaagtatttg aagcagttcc aaccaaagtc tttggaaaag acaaaaaacc tacatttgaa
421 gatagtagtt gcagccttta tagattcacc acaataccta accaagacag tcagttaggc
481 aaagagaaca aactatattc acctgccagg tatgcagatg cattatttaa gtcatccgat
541 atcagatcag ccagtttaga ggacctgtgg ggaaatctga gtttaaagcc tgccaactcc
601 cctcatgtaa atatctctgc aaccttgtct ccacaaggta agctaaggat gaagcaaagt
661 aagaagtaga agacaaactt caaagttatt taaaattttt taatcttaat ctttattaga
721 ttttaaatat tcaaagtaca gagaaagagt gcactatgta ttaaagctgt ttatgttcaa
781 ttttaacaga agtctattat ctttaacaaa tagatcagtg ttagaactct tgaacactga
841 cttttgtccg atcagctggc aaaggttcag atctgagatg ttttgcatgc agatttgtat
901 tgaaaatatg ctctccgatg tttcttttcc taagatttta ttaggtcaag taaaatttga
961 aaattacatt aaaacattaa cagaattctt cggttcttcc ttgtctgtag caatggaata
1021 tagtttaatg actttaattt ccaccctttc ccccattcca gttgtggaaa ccctgagtgg
1081 aataatctgc aaccaatagt tccaaacaag tttttagc
//