LOCUS AK295937 2148 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55072 complete cds, highly similar to
Succinate dehydrogenase (ubiquinone) flavoprotein subunit,
mitochondrial precursor (EC1.3.5.1).
ACCESSION AK295937
VERSION AK295937.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2148)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2148
/clone="BRSSN2008275"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000490561"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 39..1889
/codon_start=1
/note="highly similar to Succinate dehydrogenase
(ubiquinone) flavoprotein subunit, mitochondrial
precursor (EC1.3.5.1)"
/protein_id="BAG58722.1"
/transl_table=1
/translation="MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVVGNKRAS
AKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVA
AQLENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRS
LRYDTSYFVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSC
TSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGE
RFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPG
ISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGE
AACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDK
LRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGM
VWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIQGQQ
KKPLEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPAIRSY"
BASE COUNT 507 a 525 c 641 g 475 t
ORIGIN
1 gcagggactg gcgggactgc gcggcggcaa cagcagacat gtcgggggtc cggggcctgt
61 cgcggctgct gagcgctcgg cgcctggcgc tggccaaggc gtggccaaca gtgttgcaaa
121 caggaacccg aggttttcac ttcactgttg ttgggaacaa gagggcatct gctaaagttt
181 cagattccat ttctgctcag tatccagtag tggatcatga atttgatgca gtggtggtag
241 gcgctggagg ggcaggcttg cgagctgcat ttggcctttc tgaggcaggg tttaatacag
301 catgtgttac caagctgttt cctaccaggt cacacactgt tgcagcacag ctagaaaatt
361 atggcatgcc gtttagcaga actgaagatg ggaagattta tcagcgtgca tttggtggac
421 agagcctcaa gtttggaaag ggcgggcagg cccatcggtg ctgctgtgtg gctgatcgga
481 ctggccactc gctattgcac accttatatg gaaggtctct gcgatatgat accagctatt
541 ttgtggagta ttttgccttg gatctcctga tggagaatgg ggagtgccgt ggtgtcatcg
601 cactgtgcat agaggacggg tccatccatc gcataagagc aaagaacact gttgttgcca
661 caggaggcta cgggcgcacc tacttcagct gcacgtctgc ccacaccagc actggcgacg
721 gcacggccat gatcaccagg gcaggccttc cttgccagga cctagagttt gttcagttcc
781 accccacagg catatatggt gctggttgtc tcattacgga aggatgtcgt ggagagggag
841 gcattctcat taacagtcaa ggcgaaaggt ttatggagcg atacgcccct gtcgcgaagg
901 acctggcgtc tagagatgtg gtgtctcggt ccatgactct ggagatccga gaaggaagag
961 gctgtggccc tgagaaagat cacgtctacc tgcagctgca ccacctacct ccagagcagc
1021 tggccacgcg cctgcctggc atttcagaga cagccatgat cttcgctggc gtggacgtca
1081 cgaaggagcc gatccctgtc ctccccaccg tgcattataa catgggcggc attcccacca
1141 actacaaggg gcaggtcctg aggcacgtga atggccagga tcagattgtg cccggcctgt
1201 acgcctgtgg ggaggccgcc tgtgcctcgg tacatggtgc caaccgcctc ggggcaaact
1261 cgctcttgga cctggttgtc tttggtcggg catgtgccct gagcatcgaa gagtcatgca
1321 ggcctggaga taaagtccct ccaattaaac caaacgctgg ggaagaatct gtcatgaatc
1381 ttgacaaatt gagatttgct gatggaagca taagaacatc ggaactgcga ctcagcatgc
1441 agaagtcaat gcaaaatcat gctgccgtgt tccgtgtggg aagcgtgttg caagaaggtt
1501 gtgggaaaat cagcaagctc tatggagacc taaagcacct gaagacgttc gaccggggaa
1561 tggtctggaa cacggacctg gtggagaccc tggagctgca gaacctgatg ctgtgtgcgc
1621 tgcagaccat ctacggagca gaggcacgga aggagtcacg gggcgcgcat gccagggaag
1681 actacaaggt gcggattgat gagtacgatt actccaagcc catccagggg caacagaaga
1741 agccccttga ggagcactgg aggaagcaca ccctgtccta tgtggacgtt ggcactggga
1801 aggtcactct ggaatataga cccgtgatcg acaaaacttt gaacgaggct gactgtgcca
1861 ccgtcccgcc agccattcgc tcctactgat gagacaagat gtggtgatga cagaatcagc
1921 ttttgtaatt atgtataata gctcatgcat gtgtccatgt cataactgtc ttcatacgct
1981 tctgcactct ggggaagaag gagtacattg aagggagatt ggcacctagt ggctgggagc
2041 ttgccaggaa cccagtggcc agggagcgtg gcacttacct ttgtcccttg cttcattctt
2101 gtgagatgat aaaactgggc acagctctta aataaaatat aaatgaac
//