LOCUS AK295934 2744 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51863 complete cds.
ACCESSION AK295934
VERSION AK295934.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2744)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2744
/clone="BRSSN2006813"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000490558"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 198..2387
/codon_start=1
/protein_id="BAG58719.1"
/transl_table=1
/translation="MRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQL
VLGQLIDENYLDRLAEEVNDKLQESGQVTISELCKTYDLPGNFLTQALTQRLGRIISG
HIDLDNRGVIFTEAFVARHKARIRGLFSAITRPTAVNSLISKYGFQEQLLYSVLEELV
NSGRLRGTVVGGRQDKAVFVPDIYSRTQSTWVDSFFRQNGYLEFDALSRLGIPDAVSY
IKKRYKTTQLLFLKAACVGQGLVDQVEASVEEAISSGTWVDIAPLLPTSLSVEDAAIL
LQQVMRAFSKQASTVVFSDTVVVSEKFINDCTELFRELMHQKAEKEMKNNPVHLITEE
DLKQISTLESVSTSKKDKKDERRRKATEGSGSMRGGGGGNAREYKIKKVKKKGRKDDD
SDDESQSSHTGKKKPEISFMFQDEIEDFLRKHIQDAPEEFISELAEYLIKPLNKTYLE
VVRSVFMSSTTSASGTGRKRTIKDLQEEVSNLYNNIRLFEKGMKFFADDTQAALTKHL
LKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTKLHNSLN
EKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALILHLT
SVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKKTG
QGDYPLNNELDKEQEDVASTTRKELQELSSSIKDLVLKSRKSSVTEE"
BASE COUNT 915 a 487 c 577 g 765 t
ORIGIN
1 attattatac acttcctgat ctagaatgag ctcgaaagga gaggctaacc cccgccccca
61 gtacagtact tggcaaatag ttgtccgagc ggaactgcat tgagattgtt aataaattga
121 ttgctcagaa acagctagaa gtagttcata cactcgatgg aaaggaatat attactccag
181 cccaaattag taaagaaatg agagatgagc tacatgtccg aggtggtcga gtaaacattg
241 ttgatctaca acaggtaatt aatgtggacc tgattcatat tgaaaataga attggtgaca
301 ttattaaatc agaaaagcat gttcagttag tgttgggaca actgatagat gagaattatt
361 tggatcggtt ggcagaagag gtcaatgata aattgcaaga aagtggtcag gtcaccatat
421 cagaactgtg taaaacttat gatcttcctg ggaactttct gacacaggca ctaactcagc
481 gacttggtag aattatcagt ggacatattg atcttgataa tagaggagta atttttacgg
541 aagcttttgt agctcgacat aaagcacgta tccgtggact attcagtgct attacccggc
601 ctacagctgt gaattctttg atttcaaaat atggatttca ggagcagctt ctttactctg
661 tgcttgagga acttgttaat agcggacgct tacgaggcac tgtggttggt gggagacagg
721 ataaagctgt gtttgtccct gacatctact ccaggacaca gagtacttgg gtggattcct
781 ttttcaggca gaatggctat ctagaatttg atgctttgtc cagacttgga atcccagatg
841 ctgtaagcta cataaagaaa agatataaga ctacacaact cttgtttttg aaagcagctt
901 gtgttggtca aggacttgtg gatcaagtgg aagcatcagt agaagaagcc atcagctctg
961 gaacatgggt tgatattgca cctctgctac ccacttcttt atcagttgaa gatgctgcca
1021 tattgcttca gcaggtgatg agggcattca gcaaacaggc ctcaactgta gtctttagcg
1081 acactgttgt agtcagtgaa aaatttataa atgactgtac agaactgttc cgtgagctga
1141 tgcaccagaa agctgaaaag gaaatgaaaa ataatcctgt gcatttaatc actgaagaag
1201 atctgaaaca aatctccact ttagaaagcg ttagtacaag taaaaaggat aaaaaagatg
1261 agcgaagaag gaaagcaaca gagggcagtg gaagcatgag aggaggaggt gggggcaatg
1321 ccagagagta caaaattaaa aaagtcaaga agaaaggaag aaaagatgat gatagtgatg
1381 atgaatctca atcatcccac actggaaaga agaagccaga gatcagtttt atgttccagg
1441 atgagattga agatttttta agaaaacaca tacaagatgc ccctgaggag tttatttcgg
1501 aacttgctga gtacttaata aaacctctta ataaaactta tctcgaggtg gtacgttcag
1561 tattcatgtc ttcaacaact tctgcttctg ggacgggcag aaaacgcaca atcaaggact
1621 tgcaagaaga agtttcaaac ctgtacaata acattaggtt atttgaaaaa gggatgaagt
1681 tttttgcaga tgacacacag gctgctctta ccaaacactt gctgaagtca gtgtgtactg
1741 atatcactaa cctcattttc aacttcttag cttcggattt aatgatggca gtagacgatc
1801 ctgcagccat tacaagtgaa ataagaaaga aaattttaag taaattatca gaagaaacca
1861 aagtagctct tacaaaactc cataactctc tgaatgaaaa gagcatagaa gactttattt
1921 cttgtctgga ttctgcagca gaagcttgtg atattatggt gaaaagggga gacaaaaaaa
1981 gggagagaca gatactgttc caacatcgac aagcactggc tgaacagcta aaggtcacag
2041 aagaccctgc tcttattctg cacctcacat cagtcctgtt gtttcagttt tcaacccaca
2101 gcatgctcca tgcacctgga agatgtgtcc cacagatcat tgcttttctt aatagtaaaa
2161 ttccagagga tcagcatgct cttttggtaa agtatcaagg tttggttgta aagcagctag
2221 tcagtcaaag taagaagact gggcagggag attatccctt gaataatgaa ttagacaaag
2281 aacaagaaga tgttgccagt actactcgta aagagcttca agaactttct tcatccatta
2341 aagaccttgt tctcaaatct aggaaatcat ctgtgacgga agagtaatga tcttaattta
2401 catttgtcat atagtaagca ttttccccca aggttgaagg tgagtggtca caaaaaagta
2461 gtcactatac aactcccctc tccctgcaaa aaccacctca tacacacaca attcagttaa
2521 aacagtagta ttgtattaaa tgtaaatctt aaaaagatgt gaatttttgt aaattgggtt
2581 cttcatggaa gtttttttcc acctgatttt cacacaaata ctatatgaaa tttttcacat
2641 tattttcaca taattttaaa aattacatat ttcaggtttg ttctctttcc aaatgttgaa
2701 tgaaaaacaa attttccaat ccatttatcc ctggggaagg attc
//