LOCUS AK295922 1430 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55215 complete cds, moderately similar to Mus
musculus coiled-coil domain containing 115 (Ccdc115), mRNA.
ACCESSION AK295922
VERSION AK295922.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1430)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1430
/clone="BRSSN2004238"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000490546"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 110..676
/codon_start=1
/note="moderately similar to Mus musculus coiled-coil
domain containing 115 (Ccdc115), mRNA"
/protein_id="BAG58709.1"
/transl_table=1
/translation="MGTPLDGGSRVPIGCPAKLRRVTRKKVAPDLEGWLSLAKARYAM
GAKSVGPLQYASHMEPQVCLHASEAQEGLQKFKVVRAGVHAPEEVGPREAGLRRRKGP
TKTPEPESSEAPQDPLNWFGILVPHSLRQAQASFRDGVLEAKKRKCFLERVIQCVVSP
AAEQEAEDESCPEDWAAAVPAETSAKAI"
BASE COUNT 345 a 375 c 417 g 293 t
ORIGIN
1 aattggagaa accagttgat tggttgcttc cgtgctgctt ctctaagggc gcttgccctt
61 aaagaagctg acccagaggc cttggtgctg ccggcgtggg gatccccaga tgggaacgcc
121 ccttgatgga ggatctcgtg tgcctattgg ctgtcctgcc aaactgcgga gggtgacaag
181 gaagaaggtg gctccagatc tggagggctg gctctcgctc gccaaggctc gctacgcgat
241 gggcgccaag tcggtagggc ccctgcagta tgcttcccac atggagcccc aggtctgcct
301 ccacgccagc gaggcccagg agggactcca gaagttcaag gtggtgagag ctggtgtcca
361 cgccccagag gaggtggggc ctcgcgaagc aggtctgcgg aggcgcaagg gccccactaa
421 gaccccagaa ccggagtcct ctgaggcccc tcaggacccc ctgaactggt ttggaatcct
481 agttcctcac agtctacgtc aggctcaagc aagcttccgg gatggtgtcc tggaggccaa
541 gaagagaaag tgtttcctgg agcgagtgat ccaatgtgtg gtcagccctg ctgctgaaca
601 ggaggccgaa gacgagagct gcccggagga ctgggcagca gctgttccag cagagacatc
661 agcaaaagcc atctagaggt ggatccagag tgtggactaa cagagaaaag aagtggaggg
721 agagcaggcc tgcagctggc cgcagacata gccagcctcc agaaccgcat tgactggggt
781 cgaagccagc tccggggact ccaagagaaa ctcaagcagc tggagcctgg ggctgcctga
841 catgcgcgca aagaggcagg gcagcgagca cagctgttct ccgacatggc tacgtgatct
901 caggccttct tccttcacaa ttagctcttg cccctacccc acgccagcta atgccccttc
961 tgtgtccctg ctctgcatgt ttccattttc cttaggtgtg aagtttgaag aggcaaacag
1021 taattttgaa agccactact ttgaaaccat tctaaggcct gagttcccat aggacacact
1081 cacataggca ggtacacgtt agtcaacaat tggaactgcc tcttggatca ctcagctgtg
1141 ctttcatggc tggatgatgg aacactgtgc gaagagagat gggggccagg aagtagcgct
1201 tcatgcttag tacatcctcc aaattgtctt tgctggagga gaaaaccgta ctcagccaaa
1261 agatcaggac aatatgactt gagtccacaa ggacacaaac acctgagtag ctgggcagcc
1321 cttggcaggg tctaagccag gaagtaaaaa tgatctggcc tagatattta agggaactct
1381 aggaagaggc ctaggttttt aaaatcctgt ctctttgtct taccataaga
//