LOCUS AK295916 1627 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53340 complete cds, highly similar to Homo
sapiens progestin and adipoQ receptor family member VI (PAQR6),
transcript variant 1, mRNA.
ACCESSION AK295916
VERSION AK295916.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1627
/clone="BRSSN2003085"
/clone_lib="BRSSN2"
/db_xref="H-InvDB:HIT000490540"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="substantia nigra"
CDS 602..1453
/codon_start=1
/note="highly similar to Homo sapiens progestin and
adipoQ receptor family member VI (PAQR6), transcript
variant 1, mRNA"
/protein_id="BAG58704.1"
/transl_table=1
/translation="MPPTPCRPPGCTATCTSSLCLPPHSTPSCAPASPATPVSWSWKA
LGSVRSSAQEPSPIHSCSTTSHSFIGLAPGRFDYIGEGTPGPAREEAGADAFPEHRMN
WATATSYSTSVQCWAPTSSWRQCWLIWDHAEPGWPHRNLPWAWQAQWPHWSWLQLGTY
SLLLLSQPPCFGPPVHALCCRVAHWRGVPRPNNSEAPSLTLSWRGQRPGPSADEEPRF
GPNQVGTHLSLEPTGAEERGHRREGREEEGCLGGLAECERDREGALDGSGRSAEGLRG
EMHACPG"
BASE COUNT 274 a 535 c 506 g 312 t
ORIGIN
1 ggcccgcctg cctggccact cttcctccat cagcctggct ggcagcagcc ttggactccg
61 cccgtggagc cctgggcctg ttgacccacc agcttaggag cacccaccaa gctctgggtg
121 ttctgggaag atggcatcat gtctggctac cgccgcccca ccagctcggc tttggactgt
181 gtcctcagct ccttccagat gaccaacgag acggtcaaca tctggactca cttcctgccc
241 acctggtgag gggaggctcc gccccaggcc gcggccttga gctcagaggg ggtacccagg
301 cgggcaggga ccgtccaggc ccacgggctg cagcggcagt cgcgggggtc cgcggcggcc
361 tgagcacgcg cccgccgcag gtacttcctg tggcggctcc tggcgctggc gggcggcccc
421 ggcttccgtg cggagccgta ccactggccg ctgctggtct tcctgctgcc cgcctgcctc
481 taccccttcg cgtcgtgctg cgcgcacacc ttcagctcca tgtcgccccg catgcgccac
541 atctgctact tcctcgacta cggcgcgctc agcctctaca gtctgggctg cgccttcccc
601 tatgccgcct actccatgcc ggcctcctgg ctgcacggcc acctgcacca gttctttgtg
661 cctgccgccg cactcaactc cttcctgtgc accggcctct cctgctactc ccgtttcctg
721 gagctggaaa gccctgggct cagtaaggtc ctccgcacag gagccttcgc ctatccattc
781 ctgttcgaca acctcccact cttttatcgg gctggcacca ggacgctttg attacatcgg
841 tgagggcacg cctggcccgg cccgggaaga ggcaggggca gatgccttcc cagagcacag
901 aatgaactgg gccacagcca ccagttattc cacatctgtg cagtgctggg cacccacttc
961 cagctggagg cagtgctggc tgatatggga tcacgcagag cctggctggc cacacaggaa
1021 cctgccctgg gcctggcagg cacagtggcc acactggtct tggctgcagc tgggaaccta
1081 ctcattattg ctgctttcac agccaccctg cttcgggccc ccagtacatg ccctctgctg
1141 cagggtggcc cactggaggg gggtacccag gccaaacaac agtgaggccc catccctgac
1201 cctgtcctgg agggggcaga ggccaggccc cagtgctgac gaggagccca gatttgggcc
1261 taatcaggtg gggacgcatc tcagcctgga accaacaggg gctgaggaga gagggcacag
1321 gagagagggc agagaagagg aggggtgtct agggggactg gcagagtgtg agagggaccg
1381 tgagggggct cttgatggga gtggaagaag tgctgagggt ctgagagggg agatgcatgc
1441 gtgtccaggc tgaagatgcc cctatattct gtcaaaggtt ggcgggggga ggtgttgggg
1501 tcctttcatc tggctccgtt tctggtgctt ctggaagtct ctgctcagca cagggaagaa
1561 ctaacacgac taacctaggc ctaccctgaa tgcttcttgc taaccaggcc gagaggccac
1621 acacttg
//