LOCUS AK295893 3419 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52302 complete cds, highly similar to Nuclear
receptor corepressor 1.
ACCESSION AK295893
VERSION AK295893.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3419)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3419
/clone="BRHIP3042452"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490517"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 141..3215
/codon_start=1
/note="highly similar to Nuclear receptor corepressor 1"
/protein_id="BAG58687.1"
/transl_table=1
/translation="MPPLEIVPENIKVVERGKYEDVKAGETVRSRHTSVVSSGPSVLR
STLHEAPKAQLSPGIYDDTSARRTPVSYQNTMSRGSPMMNRTSDVTISSNKSTNHERK
STLTPTQRESIPAKSPVPGVDPVVSHSPFDPHHRGSTAGEVYRSHLPTHLDPAMPFHR
ALDPAAAAYLFQRQLSPTPGYPSQYQLYAMENTRQTILNDYITSQQMQVNLRPDVARG
LSPREQPLGLPYPATRGIIDLTNMPPTILVPHPGGTSTPPMDRITYIPGTQITFPPRP
YNSASMSPGHPTHLAAAASAEREREREREKERERERIAAASSDLYLRPGSEQPGRPGS
HGYVRSPSPSVRTQETMLQQRPSVFQGTNGTSVITPLDPTAQLRIMPLPAGGPSISQG
LPASRYNTAADALAALVDAAASAPQMDVSKTKESKHEAARLEENLRSRSAAVSEQQQL
EQKTLEVEKRSVQCLYTSSAFPSGKPQPHSSVVYSEAGKDKGPPPKSRYEEELRTRGK
TTITAANFIDVIITRQIASDKDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSP
APPQEKLQTYQPEVVKANQAENDPTRQYEGPLHHYRPQQESPSPQQQLPPSSQAEGMG
QVPRTHRLITLADHICQIITQDFARNQVSSQTPQQPPTSTFQNSPSALVSTPVRTKTS
NRYSPESQAQSVHHQRPGSRVSPENLVDKSRGSRPGKSPERSHVSSEPYEPISPPQVP
VVHEKQDSLLLLSQRGAEPAEQRNDARSPGSISYLPSFFTKLENTSPMVKSKKQEIFR
KLNSSGGGDSDMAAAQPGTEIFNLPAVTTSGSVSSRGHSFADPASNLGLEDIIRKALM
GSFDDKVEDHGVVMSQPMGVVPGTANTSVVTSGETRREEGDPSPHSGGVCKPKLISKS
NSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTPGWAWEDRPSSTGSTQFPYNPL
TMRMLSSTPPTPIACAPSAVNQAAPHQQNRIWEREPAPLLSAQYETLSDSDD"
BASE COUNT 946 a 922 c 814 g 737 t
ORIGIN
1 tttcagtgga gagcattcca tccctacggg gctctatcac tcagggcaca ccaataaagt
61 ttgacaacaa ctcaggtcaa tctgccatca aacacaatgt caaatcctta atcacggggc
121 ctagcaaact atcccgtgga atgcctccgc tggaaattgt gccagagaac ataaaagtgg
181 tagaacgggg aaaatatgag gatgtgaaag caggcgagac cgtgcgttcc cggcacacgt
241 cagtggtaag ctctggcccc tccgttctta ggtccacact gcatgaagct cccaaagcac
301 aactgagccc tgggatttat gatgacacca gtgcacggag gacccctgtg agttatcaaa
361 acaccatgtc cagaggctca cccatgatga acagaacttc tgatgttaca atttcttcta
421 acaagtctac caatcatgaa aggaaatcga cactgacccc tacccagagg gaaagtatcc
481 cagcgaagtc tccagtgcct ggggtggacc ctgtcgtgag ccacagtccg tttgatcccc
541 atcacagagg cagcactgca ggcgaggttt atcggagcca cctgcccacg cacttggatc
601 cagccatgcc ttttcacagg gctttggatc ctgcagcggc tgcttacctg tttcagagac
661 agctttcacc aactccaggt tacccaagtc agtatcagct ttacgcaatg gagaacacaa
721 gacagacaat cttaaatgat tacattacct cacaacagat gcaagtgaac ttgcgtccag
781 atgtggccag aggactctcc ccaagagagc agccactggg tctcccatac ccagcaacga
841 gaggaatcat tgacctgacc aatatgcctc caacaatttt agtgcctcat ccagggggaa
901 caagcactcc tcccatggac agaatcactt atattcctgg tacacagatt actttccctc
961 ccaggccgta caactctgct tccatgtctc caggacaccc aacacacctt gcagctgctg
1021 caagtgctga gagggaacgg gaacgggagc gggagaagga gcgggagcgg gaacggattg
1081 ctgcagcttc ctccgacctc tacctgcggc caggctcaga acagcctggc cgacctggca
1141 gtcatggata tgttcgctcc ccttcccctt cagtaagaac tcaggagacc atgttgcaac
1201 agagacccag tgttttccaa ggaaccaatg gaaccagtgt aatcacacct ttggatccaa
1261 ctgctcagct acgaatcatg ccactgcctg ctgggggccc ttcaataagc caaggcctgc
1321 cagcctcccg ttacaacact gctgcggatg ccctggctgc tcttgtggat gctgcagctt
1381 ctgcacccca gatggatgtg tccaaaacaa aagagagtaa gcatgaagct gccaggttag
1441 aagaaaattt gagaagcagg tcagcagcag ttagtgaaca gcagcagcta gagcagaaaa
1501 ccctggaggt ggagaagaga tctgttcagt gtttatacac ttcttcagcc tttccaagtg
1561 gcaagcccca gcctcattct tcagtagttt attctgaggc tgggaaagat aaagggcctc
1621 ctccaaaatc cagatatgag gaagagctaa ggaccagagg gaagactacc attactgcag
1681 ctaacttcat agacgtgatc atcacccggc aaattgcctc ggacaaggat gcgagggaac
1741 gtggctctca aagttcagac tcttctagta gcttatcttc tcacaggtat gaaacaccta
1801 gcgatgctat tgaggtgata agtcctgcca gctcacctgc gccaccccag gagaaactgc
1861 agacctatca gccagaggtt gttaaggcaa atcaagcgga aaatgatcct accagacaat
1921 atgaaggacc attacatcac tatcgaccac agcaggaatc accatctccc caacaacagc
1981 tgcccccttc ttcacaggca gagggaatgg ggcaagtgcc caggacccat cggctgatca
2041 cacttgctga tcacatctgt caaattatca cacaagattt tgctagaaat caagtttcct
2101 cgcagactcc ccagcagcct cctacttcta cattccagaa ctcaccttct gctttggtat
2161 ctacacctgt gaggactaaa acatcaaacc gttacagccc agaatcccag gctcagtctg
2221 tccatcatca aagaccaggt tcaagggtct ctccagaaaa tcttgtggac aaatccaggg
2281 gaagtaggcc tggaaaatcc ccagagagga gtcacgtctc ttcggagccc tacgagccca
2341 tctccccacc ccaggttccg gttgtgcatg agaaacagga cagcttgctg ctcttgtctc
2401 agaggggcgc agagcctgca gagcagagga atgatgcccg ctcaccaggg agtataagct
2461 acttgccttc attcttcacc aagcttgaaa atacatcacc catggttaaa tcaaagaagc
2521 aggagatttt tcgtaagttg aactcctctg gtggaggtga ctctgatatg gcagctgctc
2581 agccaggaac tgagatcttt aatctgccag cagttactac gtcaggctca gttagctcta
2641 gaggccattc ttttgctgat cctgccagta atcttgggct ggaagacatt atcaggaagg
2701 ctctcatggg aagctttgat gacaaagttg aggatcatgg agttgtcatg tcccagccta
2761 tgggagtagt gcctggtact gccaacacct cagttgtgac cagtggtgag acacgaagag
2821 aggaagggga cccatcacct cattcaggag gagtttgcaa accaaagctg atcagcaagt
2881 caaacagcag gaaatctaag tctcctatac ctgggcaagg ctacttagga acggaacggc
2941 cctcttcagt ctcctctgta cattcagaag gggattacca taggcagacg ccagggtggg
3001 cctgggaaga caggccctct tcaacaggct caactcagtt tccttataac cctctgacta
3061 tgcggatgct cagcagtact ccaccaacac cgattgcatg tgccccctct gcggtgaacc
3121 aagcagctcc tcaccaacag aacaggatct gggagcgaga gcctgcccca ctgctctcag
3181 cacagtacga gaccctgtcg gatagtgatg actgaactgc acaaagtgag gggaacaggg
3241 tgcaggagag ggatctctag tttttgtggt ttaattttta gtagcaggtc aaaaacctgc
3301 cctcctgtga cttattccct gagacttttc aggagagcca gcccacagat gatgaagaaa
3361 tgatggaagt tcatttggag agtcaaatgg gaaaaaaaca aacaaaaaac tgcctttga
//