LOCUS AK295879 1390 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50546 complete cds.
ACCESSION AK295879
VERSION AK295879.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1390)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1390
/clone="BRHIP3041332"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490503"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 171..1091
/codon_start=1
/protein_id="BAG58676.1"
/transl_table=1
/translation="MKKDEPPLDFPDTLEGFEYAFNEKGQLRHIKTGEPFVFNYREDL
HRWNQKRYEALGEIITKYVYELLEKDCNLKKVSIPEGYGVIVLNPNENYIEVEKPKIH
VQSSSDSSDEPAEKRERKDKVSKETKKRRDFYEKYRNPQREKEMMQLYIRENGSPEEH
AIYVWDHFIAQAAAENVFFVAHSYGGLAFVELMIQREADVKNKVTAVALTDSVHNVWH
QEAGKTIREWMRENCCNWVSSSEPLDTSVESMLPDCPRVSAGTDRHELTSWKSFPSIF
KFFTEASEAKTSSLKPAVTRRSHRIKHEEL"
BASE COUNT 405 a 314 c 348 g 323 t
ORIGIN
1 gcaactcgaa cttggtcggg gcgcggatcc cgagagggaa agtcataaca accgcacgag
61 ggagttcgac tggcgaactg gaaggccacg cctcctcccg cctgccccct cagccctgtg
121 gctgggggca gagctcagat ttattatcta ggatagattt ggatgaacta atgaaaaaag
181 atgaaccgcc tcttgatttt cctgataccc tggaaggatt tgaatatgct tttaatgaaa
241 agggacagtt aagacacata aaaactgggg aaccatttgt ttttaactac cgggaagatt
301 tacacagatg gaaccagaaa agatacgagg ctctaggaga gatcatcacg aagtatgtat
361 atgagctcct ggaaaaggat tgtaatttga aaaaagtatc tattccagaa ggatatggag
421 taatagtact aaatcccaat gaaaactata ttgaagtaga aaagccgaag atacacgtac
481 agtcatcatc tgatagttca gatgaaccag cagaaaaacg ggaaagaaaa gataaagttt
541 ctaaagaaac aaagaagcga cgtgatttct atgagaagta tcgtaacccc caaagagaaa
601 aagaaatgat gcaattgtat atcagagaaa atggttctcc tgaagaacat gcaatctatg
661 tttgggatca tttcatagct caggctgctg ctgagaatgt gtttttcgtt gctcacagct
721 atggaggact tgcttttgtt gaactgatga ttcaacgaga agccgatgta aaaaataagg
781 taactgctgt ggcattgaca gactctgttc acaatgtgtg gcatcaagaa gctggcaaaa
841 cgattcgaga atggatgaga gagaactgtt gtaattgggt ctctagctca gaaccattag
901 acacatcagt ggagtccatg ctacctgatt gcccccgggt ctcagcaggc accgaccgtc
961 acgagctaac ttcctggaag agctttccgt ctattttcaa attctttacc gaagcctcag
1021 aggccaagac cagctccctg aagccggctg tgacgcgccg ctcccaccgc atcaagcacg
1081 aagagctgta agaggagcga gcgcgacggg ggaggccgcc ctggcgcacc cacccgcacg
1141 cctcctcact gcttgtgtcg tcgagcggac tcccagcccc tcattagatt gttttcttcc
1201 cagagcccag ggtcgtgata tatacatcta aatagcgttt tgcattattt ctagatgagt
1261 gcaactgtca aagcaatatg ggttcactgg tcgtgcttcc tgcgggctga gcgcgggctg
1321 agcgctgcca gtcagcgctc acattaaggc tgacagcgcc ctgcctggct cggccggcga
1381 agctctaatt
//