LOCUS AK295872 1004 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ56696 complete cds, highly similar to HLA class II histocompatibility antigen, DMbeta chain precursor. ACCESSION AK295872 VERSION AK295872.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1004) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1004 /clone="BRHIP3040322" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000490496_04" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 220..870 /codon_start=1 /note="highly similar to HLA class II histocompatibility antigen, DMbeta chain precursor" /protein_id="BAG58670.1" /transl_table=1 /translation="MITFLPLLLGLSLGCTGAGGFVAHVESTCLLDDAGTPKDFTYCI SFNKDLLTCWDPEENKMAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQ PFWGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHS SAHKTAQPNGDWTYQTLSHLTLTPSYGDTYTCVVEHIGAPEPILRDWSKCMADGWN" BASE COUNT 253 a 250 c 291 g 210 t ORIGIN 1 tggactcccg tgagctggaa ggaacagatt taatatctag gggctgggta tccccacatc 61 actcatttgg ggggtcaagg gacccgggca atatagtatt ctgctcagtg tctggagatc 121 atctacccag gctggggctt ctgggacagg cgaggaccca cggaccctgg aagagctggt 181 ccaggggact gaactcccgg catctttaca gagcagagca tgatcacatt cctgccgctg 241 ctgctggggc tcagcctggg ctgcacagga gcaggtggct tcgtggccca tgtggaaagc 301 acctgtctgt tggatgatgc tgggactcca aaggatttca catactgcat ctccttcaac 361 aaggatctgc tgacctgctg ggatccagag gagaataaga tggccccttg cgaatttggg 421 gtgctgaata gcttggcgaa tgtcctctca cagcacctca accaaaaaga caccctgatg 481 cagcgcttgc gcaatgggct tcagaattgt gccacacaca cccagccctt ctggggatca 541 ctgaccaaca ggacacggcc accatctgtg caagtagcca aaaccactcc ttttaacacg 601 agggagcctg tgatgctggc ctgctatgtg tggggcttct atccagcaga agtgactatc 661 acgtggagga agaacgggaa gcttgtcatg cctcacagca gtgcgcacaa gactgcccag 721 cccaatggag actggacata ccagaccctc tcccatttaa ccttaacccc ctcttacggg 781 gacacttaca cctgtgtggt agagcacatt ggggctcctg agcccatcct tcgggactgg 841 agtaagtgta tggcagatgg atggaattag ggtcaaagca gagaaaatga gatgtggatc 901 gatacatggt acatggtaga cagcgaagtg ctgaaaatgg ggactgagtc tggaggaact 961 tacggggggc ttaggaccag aatggggaaa tgggataaag aaat //