LOCUS       AK295872                1004 bp    mRNA    linear   HUM 24-JUL-2008
DEFINITION  Homo sapiens cDNA FLJ56696 complete cds, highly similar to HLA
            class II histocompatibility antigen, DMbeta chain precursor.
ACCESSION   AK295872
VERSION     AK295872.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..1004
                     /clone="BRHIP3040322"
                     /clone_lib="BRHIP3"
                     /db_xref="H-InvDB:HIT000490496_04"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="hippocampus"
     CDS             220..870
                     /codon_start=1
                     /note="highly similar to HLA class II histocompatibility
                     antigen, DMbeta chain precursor"
                     /protein_id="BAG58670.1"
                     /transl_table=1
                     /translation="MITFLPLLLGLSLGCTGAGGFVAHVESTCLLDDAGTPKDFTYCI
                     SFNKDLLTCWDPEENKMAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQ
                     PFWGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHS
                     SAHKTAQPNGDWTYQTLSHLTLTPSYGDTYTCVVEHIGAPEPILRDWSKCMADGWN"
BASE COUNT          253 a          250 c          291 g          210 t
ORIGIN      
        1 tggactcccg tgagctggaa ggaacagatt taatatctag gggctgggta tccccacatc
       61 actcatttgg ggggtcaagg gacccgggca atatagtatt ctgctcagtg tctggagatc
      121 atctacccag gctggggctt ctgggacagg cgaggaccca cggaccctgg aagagctggt
      181 ccaggggact gaactcccgg catctttaca gagcagagca tgatcacatt cctgccgctg
      241 ctgctggggc tcagcctggg ctgcacagga gcaggtggct tcgtggccca tgtggaaagc
      301 acctgtctgt tggatgatgc tgggactcca aaggatttca catactgcat ctccttcaac
      361 aaggatctgc tgacctgctg ggatccagag gagaataaga tggccccttg cgaatttggg
      421 gtgctgaata gcttggcgaa tgtcctctca cagcacctca accaaaaaga caccctgatg
      481 cagcgcttgc gcaatgggct tcagaattgt gccacacaca cccagccctt ctggggatca
      541 ctgaccaaca ggacacggcc accatctgtg caagtagcca aaaccactcc ttttaacacg
      601 agggagcctg tgatgctggc ctgctatgtg tggggcttct atccagcaga agtgactatc
      661 acgtggagga agaacgggaa gcttgtcatg cctcacagca gtgcgcacaa gactgcccag
      721 cccaatggag actggacata ccagaccctc tcccatttaa ccttaacccc ctcttacggg
      781 gacacttaca cctgtgtggt agagcacatt ggggctcctg agcccatcct tcgggactgg
      841 agtaagtgta tggcagatgg atggaattag ggtcaaagca gagaaaatga gatgtggatc
      901 gatacatggt acatggtaga cagcgaagtg ctgaaaatgg ggactgagtc tggaggaact
      961 tacggggggc ttaggaccag aatggggaaa tgggataaag aaat
//