LOCUS AK295862 3470 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60272 complete cds.
ACCESSION AK295862
VERSION AK295862.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3470)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3470
/clone="BRHIP3039223"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490486"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 796..3366
/codon_start=1
/protein_id="BAG58665.1"
/transl_table=1
/translation="MSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIGTA
CTLDKLSSPAAFLPACNSPSKEMKESPLVHPPSHGCRSTHNSPIHTATGSRLTQNFSV
SVPTLIYTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGFLVHVGGV
VSARSVKLLDRIHNPAFVGIMGNTRSYKLLDWNSFNSDEPETRDAWWAEIRQEIKSHA
KALGCHAVVGYSESTSICEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTR
CGFCHIPYDELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLC
RLKKKAQAEANATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMG
LASATGVYLAALPTPGGIQIAGKTPNDGSYEQHISHMQKKINDTIAKNKELYEINPPE
ISEEIIGSPIPEPRQRSRLLRSQSESSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHS
LLTDVPPPSGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLC
ENLLKSLYFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTKTPV
EKSLQRASTDNEELLQFPLELCSDSLPSHPFPPAKEHLESASSNSGIPAAQRDRCSSW
IELIKLKAQTIRRGPIKTTMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIP
GAKITKYLGIINMFFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSY
IMKQCVFMENPNKNQAQCLINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGGVTT
"
BASE COUNT 1040 a 709 c 774 g 947 t
ORIGIN
1 gaggagagac aagcaggggc ggcagaggct caacgggatg ctgactgggt tttgcttttc
61 gtcccagcct tgtggggccg ggacggaaga acccatcaaa gcccttcctc ccgccgcctc
121 tccggaatga ggtctcagca cccgcgcggg acagcaccct tcctcctgcg acagagccca
181 agaagaggcc gaaaccgaga ccatgccagg gaagctgaag gtgaaaatcg tggccgggcg
241 ccatttgcca gtgatggacc gtgctagtga cctgactgat gccttcgtgg aggtaaaatt
301 ggtaatacca cctttaaaac agatgtgtac cttaagtcac tcaaccctca gtggaactcg
361 gagtggttta aatttgaggt ggatgatgaa gacttacaag atgaaccttt acagatcaca
421 gttcttgacc atgatactta cagtgcaaat gatgccattg gtaaagtgta cattgatatt
481 gatcctttac tgtatagtga agctgcaaca gtcatctcag gatggtttcc aatttatgac
541 accatacatg gtatccgtgg ggaaatcaat gtagttgtca aagtagacct cttcaatgat
601 ttaaatcgat ttaggcagtc atcatgtgga gtcaaattct tttgcacaac gtctattcca
661 aaatgctata gagctgtgat aattcatgga tttgtagaag aacttgtggt caatgaagac
721 ccagaatatc agtggattga tcgaattcgc acaccaaggg catcaaatga ggccagacag
781 agactcattt cgttaatgtc aggtgagctg cagaggaaga ttggcttgaa agtacttgaa
841 atgagaggaa atgcagttgt ggggtactta cagtgtttcg atctggaggg cgagtctggg
901 ttagtggtgc gagccatagg aacggcgtgt actctggata aattaagtag cccagcagca
961 ttccttcctg catgtaattc cccatccaaa gaaatgaagg agtctccgct ggttcatcct
1021 ccaagccatg gatgccgctc gactcacaac agcccaattc acactgctac tggctcacga
1081 cttactcaga acttctctgt gtctgttccc actctcatct atactggaat gggaagtggt
1141 agtgctggaa aagaaggggg gccctttaaa gctcttttaa gacaacagac tcaatcagcg
1201 ttggaacaga gggaatttcc attttttacc ttgacggcat ttcctcctgg attccttgta
1261 cacgttgggg gtgtagttag tgcacgttct gtgaagcttt tggatcgtat ccacaatcct
1321 gcctttgtcg gaattatggg taacacaaga tcttacaaac tgctagactg gaatagtttc
1381 aattcagatg aaccagaaac tcgagatgca tggtgggcag aaatcagaca agaaataaaa
1441 tcacatgcta aagcattagg ctgtcatgct gtagtgggct acagtgaatc aactagcatc
1501 tgtgaagagg tctgcatttt atctgcatct ggcacagcgg ctgtactgaa tcctagattt
1561 ctgcaggatg gcaccgtgga aggctgtttg gaacagaggc ttgaagaaaa tttgcctaca
1621 cgttgtggat tttgtcatat accatatgat gaactgaata tgccatttcc agctcatctc
1681 acatattgct ataactgcag gaaacaaaaa gttcctgatg ttctgtttac aactatagac
1741 ctcccaacag atgcaacagt tattggaaaa ggttgtctta ttcaagcaag gttatgtcgc
1801 ttaaaaaaga aagcacaggc agaagcaaat gctacagcta tcagtaatct cttgccattt
1861 atggaatatg aagtgcatac tcagctaatg aataaactaa aactcaaagg aatgaatgct
1921 ttgtttggac taagaattca gatcacagtg ggtgaaaata tgttgatggg cttagcgtct
1981 gccacaggtg tgtatttagc agctttacca actcctggtg gtattcagat tgctgggaag
2041 actcctaatg atggctcata tgaacaacac atctctcata tgcagaagaa gataaatgac
2101 acaattgcta aaaacaaaga gttatatgaa atcaatcctc cagagatatc tgaagagatt
2161 ataggatcac ccatcccaga acctaggcaa cgctcaagac ttctaagatc tcaatcagaa
2221 agctcggatg aagttacaga attagacctt tcacatggga aaaaagatgc ttttgttttg
2281 gagattgatg acacagatgc catggaagat gtccattctc tacttactga tgttcctcct
2341 ccttcaggct tttatagttg taatacagaa attatgcccg gtataaataa ttggacctct
2401 gaaatacaga tgttcacttc agtaagagta atcagattaa gcagcctcaa cctgactaat
2461 caagctctca ataagaactt taatgatctc tgtgaaaatt tgctcaagag cctgtacttt
2521 aaactacgat ctatgatccc ctgctgcctt tgccatgtaa attttacagt atctctgcct
2581 gaagatgaat taattcaggt tacagtcacg gcagtcgcaa tcacttttga caaaaatcag
2641 gctttacaaa ccacaaaaac ccctgttgaa aagtcattgc aaagagcctc aacagataat
2701 gaagaacttt tacaatttcc actggaactg tgttcagatt cacttccttc tcatcctttt
2761 ccaccagcta aagaacacct ggagagtgca agttctaact caggtatacc agctgcacag
2821 agagacagat gcagcagctg gatagagctc attaaactga aagctcagac cataaggcgt
2881 ggaccaatta agacaaccat gacagttgaa aaagcaagtc cagtgggtga tggaaatttc
2941 cggaatcgtt ctgctccacc ttgtgcaaat tccacagttg gggttgttaa gatgacacct
3001 ctttctttta ttcctggagc aaaaataact aagtatcttg ggataattaa catgtttttt
3061 attcgagaga ctacttctct tcgggaggaa ggaggagtca gtggttttct ccatgctttt
3121 attgctgagg tgtttgcaat ggtgagagct catgttgctg cattaggagg gaatgctgtt
3181 gtctcctaca taatgaagca gtgtgtcttc atggagaatc caaataaaaa ccaggcacag
3241 tgtcttataa atgtaagtgg tgacgcagtg gtttttgttc gtgaatctga cttagaagtg
3301 gtgtcatctc agcaacctac taccaactgc cagtcatcat gtactgaagg cggagttaca
3361 acctgaggaa aattaggaaa aaagagctca actaaatgaa attcatcaat ctctgttatt
3421 ttgtcattaa ttatcttctt agacttaaaa ttgaacttga gataaataag
//