LOCUS AK295823 1625 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ60578 complete cds, highly similar to Tenascin-R precursor. ACCESSION AK295823 VERSION AK295823.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1625) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1625 /clone="BRHIP3032863" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000490447" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 475..1569 /codon_start=1 /note="highly similar to Tenascin-R precursor" /protein_id="BAG58640.1" /transl_table=1 /translation="MGADGETVVLKNMLIGVNLILLGSMIKPSECQLEVTTERVQRQS VEEEGGIANYNTSSKEQPVVFNHVYNINVPLDNLCSSGLEASAEQEVSAEDETLAEYM GQTSDHESQVTFTHRINFPKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCNANCC QESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQ CICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRC ANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCVCEEGYQGPDCSAADGPGGPPA PAAGAWRLEWCHHHGAGARSHLQHQRLRCH" BASE COUNT 364 a 434 c 496 g 331 t ORIGIN 1 aagacccagg gagagtgaga gaagggggtc ctctctgacc caaggaatta ccactagtgg 61 agtgaagcca cctgactttt tgatcttatt ttggttgcct cctcattctc cttccacccg 121 tagccctgac agcttgggtt tcatttcttt cgtggagcct tgtctcttcc tcccagaata 181 ggaggaaggg aagagaaggg aaagaggagg gctctctagg tgagcgcatc agctggctcc 241 agcctgagca agcaagaatt ttcttcccag gaagctcctc tcgctccccg gccgcccacc 301 cccagcctgg gtggctgtat cgttttaact gcatagaggg caggtctctt ttggaattag 361 gattaaagaa agtgcagtaa agagaaagca tcgaagacac catcacaaaa gattcccaca 421 actccatgct gtgtgctgca ggctggtcct gaacccagat ctctggctga gaggatgggg 481 gcagatgggg aaacagtggt tctgaagaac atgctcattg gcgtcaacct gatccttctg 541 ggctccatga tcaagccttc agagtgtcag ctggaggtca ccacagaaag ggtccagaga 601 cagtcagtgg aggaggaggg aggcattgcc aactacaaca cgtccagcaa agagcagcct 661 gtggtcttca accacgtgta caacattaac gtgcccttgg acaacctctg ctcctcaggg 721 ctagaggcct ctgctgagca ggaggtgagt gcagaagacg agactctggc agagtacatg 781 ggccagacct cagaccacga gagccaggtc acctttacac acaggatcaa cttccccaaa 841 aaggcctgtc catgtgccag ttcagcccag gtgctgcagg agctgctgag ccggatcgag 901 atgctggaga gggaggtgtc ggtgctgcga gaccagtgca acgccaactg ctgccaagaa 961 agtgctgcca caggacaact ggactatatc cctcactgca gtggccacgg caactttagc 1021 tttgagtcct gtggctgcat ctgcaacgaa ggctggtttg gcaagaattg ctcggagccc 1081 tactgcccgc tgggttgctc cagccggggg gtgtgtgtgg atggccagtg catctgtgac 1141 agcgagtaca gcggggatga ctgttccgaa ctccggtgcc caacagactg cagctcccgg 1201 gggctctgcg tggacgggga gtgtgtctgt gaagagccct acactggcga ggactgcagg 1261 gaactgaggt gccctgggga ctgttcgggg aaggggagat gtgccaacgg tacctgttta 1321 tgcgaggagg gctacgttgg tgaggactgc ggccagcggc agtgtctgaa tgcctgcagt 1381 gggcgaggac aatgtgagga ggggctctgc gtctgtgaag agggctacca gggccctgac 1441 tgctcagcag ccgacggccc tggggggcct ccagctccag cagcgggtgc ctggagattg 1501 gagtggtgtc accatcacgg agctggagcc aggtctcacc tacaacatca gcgtctacgc 1561 tgtcattagc aacatcctca gccttcccat cactgccaag gtggccaccc atctctccac 1621 tcctc //