LOCUS AK295816 3029 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56957 complete cds, highly similar to
Transmembrane protein 16C.
ACCESSION AK295816
VERSION AK295816.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3029)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3029
/clone="BRHIP3032176"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490440"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 146..2653
/codon_start=1
/note="highly similar to Transmembrane protein 16C"
/protein_id="BAH12191.1"
/transl_table=1
/translation="MNYIASSGPLFKDGKKRIDYILVYRKTNIQYDKRNTFEKNLRAE
GLMLEKEPAIASPDIMFIKIHIPWDTLCKYAERLNIRMPFRKKCYYTDGRSKSMGRMQ
TYFRRIKNWMAQNPMVLDKSAFPDLEESDCYTGPFSRARIHHFIINNKDTFFSNATRS
RIVYHMLERTKYENGISKVGIRKLINNGSYIAAFPPHEGAYKSSQPIKTHGPQNNRHL
LYERWARWGMWYKHQPLDLIRLYFGEKIGLYFAWLGWYTGMLIPAAIVGLCVFFYGLF
TMNNSQVSQEICKATEVFMCPLCDKNCSLQRLNDSCIYAKVTYLFDNGGTVFFAIFMA
IWATVFLEFWKRRRSILTYTWDLIEWEEEEETLRPQFEAKYYKMEIVNPITGKPEPHQ
PSSDKVTRLLVSVSGIFFMISLVITAVFGVVVYRLVVMEQFASFKWNFIKQYWQFATS
AAAVCINFIIIMLLNLAYEKIAYLLTNLEYPRTESEWENSFALKMFLFQFVNLNSSIF
YIAFFLGRFVGHPGKYNKLFDRWRLEECHPSGCLIDLCLQMGVIMFLKQIWNNFMELG
YPLIQNWWSRHKIKRGIHDASIPQWENDWNLQPMNLHGLMDEYLEMVLQFGFTTIFVA
AFPLAPLLALLNNIIEIRLDAYKFVTQWRRPLPARATDIGIWLGILEGIGILAVITNA
FVIAITSDYIPRFVYEYKYGPCANHVEPSENCLKGYVNNSLSFFDLSELGMGKSGYCR
YRDYRGPPWSSKPYEFTLQYWHILAARLAFIIVFEHLVFGIKSFIAYLIPDVPKGLHD
RIRREKYLVQEMMYEAELEHLQQQRRKSGQPVHHEWP"
BASE COUNT 914 a 592 c 679 g 844 t
ORIGIN
1 agttaatgga aaaagcaggc ggtgaaaggg agaactttca gttgtcacac tgaagagtgc
61 tttaaagaag attgtcattt gagactgttg tcagcaatga aggattccaa atgcagctga
121 actcagaatt ctgactgtga atgacatgaa ttacatagca tccagtggac ctctgttcaa
181 agatggcaaa aagagaattg attacatctt ggtttataga aagacaaata tacaatatga
241 taaaagaaac acatttgaaa agaacctcag agcagaaggc ttgatgttgg agaaggagcc
301 agctattgca agccccgata tcatgtttat taaaattcac attccatggg acacgctgtg
361 caagtatgca gagaggctga atatcaggat gcccttcagg aaaaaatgct attacactga
421 cgggaggagc aaatcaatgg gcaggatgca aacttatttt agaagaatca aaaactggat
481 ggcccaaaac ccaatggttc ttgacaagtc agcttttcca gacctagagg agtcagactg
541 ctatactggc cccttcagcc gtgcacggat tcaccacttc ataataaata ataaagacac
601 cttcttcagc aatgctactc gaagcagaat agtctatcac atgctggaac gcaccaaata
661 tgaaaatgga atatcaaaag tgggtatccg taaacttata aacaatggct catacatagc
721 agcgtttcca ccacatgagg gagcctacaa aagtagccag cccattaaaa cccatggacc
781 tcagaataac agacatctat tatatgagcg ctgggcacgc tggggaatgt ggtataagca
841 tcagcctctg gatttaatca ggctgtactt tggtgagaag attggactat actttgcttg
901 gctgggatgg tatactggaa tgttgattcc tgcagcaatt gttggtttgt gcgttttctt
961 ctatggatta tttacaatga ataatagtca agtaagccaa gaaatttgta aagccactga
1021 agtctttatg tgccctctct gtgacaagaa ctgctccctg cagagactca acgacagctg
1081 tatctatgcc aaggtgacat atttgttcga taatggaggg acagtcttct ttgctatttt
1141 tatggcaata tgggccacag tcttcctgga gttttggaaa aggagaagga gtatactgac
1201 ctatacttgg gaccttatcg aatgggaaga agaggaggaa acacttcgtc cccagtttga
1261 agccaagtat tacaagatgg agattgtaaa tcccatcacg ggaaaacctg aaccacatca
1321 gccttcctca gacaaagtca ctcgtcttct tgtttctgtc tcaggaatat tcttcatgat
1381 atccttggtg atcactgccg tgtttggagt tgtggtgtac cgcctggttg tcatggaaca
1441 gtttgcatca ttcaagtgga atttcatcaa acaatactgg cagtttgcaa catctgctgc
1501 tgctgtctgt atcaatttca taatcattat gttgctgaat cttgcttatg aaaaaattgc
1561 ttacctcctc accaatttag aatatcctcg aacagaatca gagtgggaaa acagcttcgc
1621 cctgaagatg ttcctcttcc agtttgtcaa tttaaacagt tccatcttct atatcgcttt
1681 ctttttggga agattcgtag gccacccagg aaaatacaat aaactttttg accggtggag
1741 actggaggaa tgtcatccta gtggctgttt gatagacctc tgcctccaga tgggtgtcat
1801 catgtttttg aagcaaatat ggaacaactt catggaacta ggatacccgt tgatccagaa
1861 ctggtggtca cgacataaaa tcaagcgggg aatacatgat gcttccatac ctcagtggga
1921 aaatgattgg aatctgcagc ccatgaacct tcatggactg atggatgagt acttagaaat
1981 ggttttgcaa tttggtttta ccaccatctt tgttgcggct tttcctctag cccctctttt
2041 ggctttgtta aacaatatca ttgaaatcag gctggatgca tacaaatttg tcactcaatg
2101 gcggaggcct ttgccagccc gagcaactga cataggtatc tggcttggaa ttctcgaagg
2161 aatcggtata ttggctgtga tcaccaatgc atttgtaatt gctattactt ctgattacat
2221 cccacgtttt gtttatgaat acaaatatgg cccctgtgca aatcatgtag aaccaagtga
2281 aaattgcttg aagggatatg tcaacaatag cctatccttc tttgacctga gtgagcttgg
2341 tatgggaaaa tctggttatt gcaggtacag agactacaga ggcccgccct ggagttccaa
2401 accctatgag tttactttac aatactggca tatccttgct gctagattgg ccttcattat
2461 tgtgtttgag caccttgttt ttgggattaa gtcattcatc gcatacctga ttccagacgt
2521 accaaagggt ctacatgacc gaatacgacg agagaagtac ttagttcaag aaatgatgta
2581 tgaggctgaa ctggaacatt tgcaacaaca acggagaaaa agtggtcagc ctgttcacca
2641 tgaatggcct tagttgacac ctgttaccca ttaggggtga taacattaat gggaagaaat
2701 gatggcaact ttgaatgcta ggtgaaatct aggaggaagg catacttggc aaaccacatg
2761 tataatatgc tacttggaaa tgtatcacag ccatctctgg gatttgaaat atccagactt
2821 gtagggaaga aaacaatgac ttgacgacct taaaaagggt tagattgaca ttgcaggaag
2881 ccaggatgta attctcagaa ccagtctcag ggagatatat gcttggagaa ctctgccttc
2941 catcaactgc agtgtaatgg gaaagagggt ggtgaggttt tgaaagacag atttccatgt
3001 aaatgtgcac aagccaggca tggcttaaa
//