LOCUS AK295810 4042 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58531 complete cds, highly similar to Homo
sapiens SEC31-like 1 (SEC31L1), transcript variant 1, mRNA.
ACCESSION AK295810
VERSION AK295810.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4042)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4042
/clone="BRHIP3031669"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490434"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 28..3630
/codon_start=1
/note="highly similar to Homo sapiens SEC31-like 1
(SEC31L1), transcript variant 1, mRNA"
/protein_id="BAG58628.1"
/transl_table=1
/translation="MLGESDERCTNAGSGCRRSSPGTSAQQLDATFSTNASLEIFELD
LSDPSLDMKSCATFSSSHRYHKLIWGPYKMDSKGDVSGVLIAGGENGNIILYDPSKII
AGDKEVVIAQNDKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMTPGAKT
QPPEDISCIAWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHP
DVATQMVLASEDDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGK
DAKILCSNPNTGEVLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSTD
GLRQKQVDKLSSSFGNLDPFGTGQPLPPLQIPQQTAQHSIVLPLKKPPKWIRRPVGAS
FSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSRSDQLQQAVQSQGFI
NYCQKKIDASQTEFEKNVWSFLKVNFEDDSRGKYLELLGYRKEDLGKKIALALNKVDG
ANVALKDSDQVAQSDGEESPAAEEQLLGEHIKEEKEESEFLPSSGGTFNISVSGDIDG
LITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLARTQKKYFAKSQSKITRLI
TAVVMKNWKEIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGTRLENEGDSLLQTQ
ACLCYICAGNVEKLVACWTKAQDGSHPLSLQDLIEKVVILRKAVQLTQAMDTSTVGVL
LAAKMSQYANLLAAQGSIAAALAFLPDNTNQPNIMQLRDRLCRAQGEPVAGHESPKIP
YEKQQLPKGRPGPVAGHHQMPRVQTQQYYPHGENPPPPGFIMHGNVNPNAAGQLPTSP
GHMHTQVPPYPQPQPYQPAQPYPFGTGGSAMYRPQQPVAPPTSNAYPNTPYISSASSY
TGQSQLYAAQHQASSPTSSPATSFPPPPSSGASFQHGGPGAPPSSSAYALPPGTTGPQ
NGWNDPPALNRVPKRKKMPENFMPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQS
SFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLPTKKIT
KKPIPDEHLILKTTFEDLIQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQTLSPTI
TSGLHNIARSIETRNYSEGLTMHTHIVSTSNFSETSAFMPVLKVVLTQANKLGV"
BASE COUNT 1129 a 969 c 877 g 1067 t
ORIGIN
1 ctggccgggg aggaggggcg gcggcgaatg ctgggagagt ccgacgagcg ctgcactaac
61 gcaggatccg gctgccgaag gtcctcgcca ggaacatctg ctcagcaatt ggatgcaaca
121 tttagtacga atgcttccct tgagatattt gaattagacc tctctgatcc atccttggat
181 atgaaatctt gtgccacatt ctcctcttct cacaggtacc acaagttgat ttgggggcct
241 tataaaatgg attccaaagg agatgtctct ggagttctga ttgcaggtgg tgaaaatgga
301 aatattattc tctatgatcc ttctaaaatt atagctggag acaaggaagt tgtgattgcc
361 cagaatgaca agcatactgg cccagtgaga gccttggatg tgaacatttt ccagactaat
421 ctggtagctt ctggtgctaa tgaatctgaa atctacatat gggatctaaa taattttgca
481 accccaatga caccaggagc caaaacacag ccgccagaag atatcagctg cattgcatgg
541 aacagacaag ttcagcatat tttagcatca gccagtccca gtggccgggc cactgtatgg
601 gatcttagga aaaatgagcc aatcatcaaa gtcagtgacc atagtaacag aatgcattgt
661 tctgggttgg catggcatcc tgatgttgct actcagatgg tccttgcctc cgaggatgac
721 cggttaccag tgatccagat gtgggatctt cgatttgctt cctctccact tcgtgtcctg
781 gaaaaccatg ccagggggat tttggcaatt gcttggagca tggcagatcc tgaattgtta
841 ctgagctgtg gaaaagatgc taagattctc tgctccaatc caaacacagg agaggtgtta
901 tatgaacttc ccaccaacac acagtggtgc ttcgatattc agtggtgtcc ccgaaatcct
961 gctgtcttat cagctgcttc gtttgatggg cgtatcagtg tttattctat catgggagga
1021 agcacagatg gtttaagaca gaaacaagtt gacaagcttt catcatcttt tgggaatctt
1081 gatccctttg gcacaggaca gccccttcct ccgttacaaa ttccacagca gactgctcag
1141 catagtatag tgctgcctct gaagaagccg cccaagtgga ttcgaaggcc tgttggtgct
1201 tctttttcat ttggaggcaa actggttacg tttgagaatg tcagaatgcc ttctcatcag
1261 ggagctgagc agcagcagca gcagcaccat gtgttcatta gtcaggttgt aacagaaaag
1321 gagttcctca gccgatcaga ccaacttcag caggctgtgc agtcacaagg atttatcaat
1381 tattgccaaa aaaaaattga tgcttctcag actgaatttg agaaaaatgt gtggtccttt
1441 ttgaaggtaa actttgagga tgattctcgt ggaaaatacc ttgaacttct aggatacaga
1501 aaagaagatc taggaaagaa gattgctttg gccttgaaca aagtggatgg agccaatgtg
1561 gctcttaaag actctgacca agtagcacag agtgatgggg aggagagccc tgctgctgaa
1621 gagcagctct tgggagagca cattaaagag gaaaaagaag aatctgaatt tctaccctca
1681 tctggaggaa catttaatat ctctgtcagt ggggacattg atggtttaat tactcaggct
1741 ttgctgacgg gcaattttga gagtgctgtt gacctttgtt tacatgataa ccgcatggcc
1801 gatgccatta tattggccat agcaggtgga caagaactct tggctcgaac ccagaaaaaa
1861 tacttcgcaa aatcccaaag caaaattacc aggctcatca ctgcagtggt gatgaagaac
1921 tggaaagaga ttgttgagtc ttgtgatctt aaaaattgga gagaggcttt agctgcagta
1981 ttgacttatg caaagccgga tgaattttca gccctttgtg atcttttggg aaccaggctt
2041 gaaaatgaag gagatagcct cctgcagact caagcatgtc tctgctatat ttgtgcaggg
2101 aatgtagaga aattagttgc atgttggact aaagctcaag atggaagcca ccctttgtca
2161 cttcaggatc tgattgagaa agttgtcatc ctgcgaaaag ctgtgcaact cactcaagcc
2221 atggacacta gtactgtagg agttctcttg gctgcgaaga tgagtcagta tgccaatttg
2281 ttggcagctc agggcagtat tgctgcagcc ttggcttttc ttcctgacaa caccaaccag
2341 ccaaatatca tgcagcttcg tgacagactt tgtagagcac aaggagagcc tgtagcagga
2401 catgaatcac ctaaaattcc gtacgagaaa cagcagctcc ccaagggcag gcctggacca
2461 gttgctggcc accaccagat gccaagagtt caaactcaac aatattatcc ccatggagaa
2521 aatcctccac ctccgggttt cataatgcat ggaaatgtta atccaaatgc tgctggtcag
2581 cttcccacat ctccaggtca tatgcacacc caggtaccac cttatccaca gccacagcct
2641 tatcaaccag cccagccgta tcccttcgga acaggggggt cagcaatgta tcgacctcag
2701 cagcctgttg ctcctcctac ttcaaacgct taccctaaca ccccttacat atcttctgct
2761 tcttcctata ctgggcagtc tcagctgtac gcagcacagc accaggcctc ttcacctacc
2821 tccagccctg ctacttcttt ccctcctccc ccttcctctg gagcatcctt ccagcatggc
2881 ggaccaggag ctccaccatc atcttcagct tatgcactgc ctcctggaac aacaggtcct
2941 cagaatggtt ggaatgaccc tccagctttg aacagagtac ccaaaaggaa gaagatgcct
3001 gaaaacttca tgcctcctgt tcccatcaca tcaccaatca tgaacccgtt gggtgacccc
3061 cagtcacaaa tgctgcagca acagccttca gctccagtac cactgtcaag ccagtcttca
3121 ttcccacagc cacatcttcc aggtggccag cccttccatg gcgtacagca acctcttggt
3181 caaacaggca tgccaccatc tttttcaaag cccaatattg aaggtgcccc aggggctcct
3241 attggaaata ccttccagca tgtgcagtct ttgccaacaa aaaaaattac caagaaacct
3301 attccagatg agcacctcat tctaaagacc acatttgagg atcttattca gcgctgcctt
3361 tcttcagcaa cagaccctca aaccaagagg aagctagatg atgccagcaa acgtttggag
3421 tttctgtatg ataaacttag ggaacagaca ctttcaccaa caatcaccag tggtttacac
3481 aacattgcaa ggagcattga aactcgaaac tactcagaag gattgaccat gcatacccac
3541 atagttagca ccagcaactt cagtgagacc tctgctttca tgccagttct caaagttgtt
3601 ctcacccagg ccaataagct gggtgtctaa aaggacagct tctcttccac tcaatattgc
3661 catttttcca aagaaacatg ttaaaaaaaa aaattataag acatggacta gtcctcatta
3721 gcatgtttgc atagcaacca gtcaagagca tttacactat ttctgctgat atactcacct
3781 tagaactgct cagaaccctg gtgctttatt tttgttttaa tcttttgttg ccagtgatga
3841 ttttcctatt ctgcaaatag tgtatttcct ggattacaca tagtatggtt tcctgaagta
3901 ttctgataaa tgtgtttttt aaaacctcaa tatacttttt agaaaaggag catctggtta
3961 tgcataaagc agagctaaaa ctaaatttct ttcatgtcct ccctacttcc tcagtgtcaa
4021 tcagattaaa gtgtgtaatc ct
//