LOCUS AK295802 1868 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55070 complete cds, highly similar to
Syntaxin-binding protein 1.
ACCESSION AK295802
VERSION AK295802.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1868)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1868
/clone="BRHIP3030852"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490426"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 128..1435
/codon_start=1
/note="highly similar to Syntaxin-binding protein 1"
/protein_id="BAH12190.1"
/transl_table=1
/translation="MAPIGLKAVVGEKIMHDVIKKVKKKGEWKVLVVDQLSMRMLSSC
CKMTDIMTEGPDKARSQLLILDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETSG
IGEARVKEVLLDEDDDLWIALRHKHIAEVSQEVTRSLKDFSSSKRMNTGEKTTMRDLS
QMLKKMPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEGEKIKDP
MRAIVPILLDANVSTYDKIRIILLYIFLKNGITEENLNKLIQHAQIPPEDSEIITNMA
HLGVPIVTDSTLRRRSKPERKERISEQTYQLSRWTPIIKDIMEDTIEDKLDTKHYPYI
STRSSASFSTTAVSARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQAN
GKWEVLIGSTHILTPTKFLMDLRHPDFRESSRVSFEDQAPTME"
BASE COUNT 488 a 520 c 484 g 376 t
ORIGIN
1 agtcggtccc tagcgcggct gcggggcgga gagctgcggc tggcccagcg cgcccacctg
61 aggaggcggc ggggtccgca ggcgtcgcgg gacgaggaga tcggagccgg gagactcgcg
121 cagcgccatg gcccccattg gcctcaaagc tgttgtcgga gagaagatta tgcatgatgt
181 gataaagaag gtcaagaaga agggggaatg gaaggtgctg gtggtggatc agttaagcat
241 gaggatgctg tcctcctgct gcaagatgac agacatcatg accgagggcc cagacaaggc
301 acgctcccag ctcctgatcc tggatcgagg ctttgacccc agctcccctg tgctccatga
361 attgactttt caggctatga gttatgatct gctgcctatc gaaaatgatg tatacaagta
421 tgagaccagc ggcatcgggg aggcacgggt gaaggaggtg ctcctggacg aggacgacga
481 cctgtggata gcactgcgcc acaagcacat cgcagaggtg tcccaggaag tcacccggtc
541 tctgaaagat ttttcttcta gcaagagaat gaatactgga gagaagacca ccatgcggga
601 cctgtcccag atgctgaaga agatgcctca gtaccagaaa gagctcagca agtactccac
661 ccacctgcac cttgctgagg actgtatgaa gcattaccaa ggcaccgtag acaaactctg
721 ccgagtggag caggacctgg ccatgggcac agatgctgag ggagagaaga tcaaggaccc
781 tatgcgagcc atcgtcccca ttctgctgga tgccaatgtc agcacttatg acaaaatccg
841 catcatcctt ctctacatct ttttgaagaa tggcatcacg gaggaaaacc tgaacaaact
901 gatccagcac gcccagatac ccccggagga tagtgagatc atcaccaaca tggctcacct
961 cggcgtgccc atcgtcaccg attccacgct gcgtcgccgg agcaagccgg agcggaagga
1021 acgcatcagc gagcagacct accagctctc acggtggact ccgattatca aggacatcat
1081 ggaggacact attgaggaca aacttgacac caaacactac ccttatatct ctacccgttc
1141 ctctgcctcc ttcagcacca ccgccgtcag cgcccgctat gggcactggc ataagaacaa
1201 ggccccaggc gagtaccgca gtggcccccg cctcatcatt ttcatccttg ggggtgtgag
1261 cctgaatgag atgcgctgcg cctacgaggt gacccaggcc aacggaaagt gggaggtgct
1321 gataggttct actcacattc ttactcccac caaatttctc atggacctga gacaccccga
1381 cttcagggag tcctctaggg tatcttttga ggatcaggct ccaacaatgg agtgagagcc
1441 aaagaaacaa agatccacac acatcctcac cccacagaaa ctgctggaca cactgaagaa
1501 actgaataaa acagatgaag aaataagcag ttaaaaaaat aagtcgcccc tccaaaacac
1561 gcccccatcc cacagcgctc cgcagcttcc caccaccgcc cgcctcagtt cctttgcgtc
1621 tgttgcctcc ccagccctgc acgccctggc tggcactgtt gccgctgcat tctcgtgttc
1681 agtgatgccc tcttcttgtt tgaaacaaaa gaaaataatg cattgtgttt tttaaaaaga
1741 gtatcttata catgtatcct aaaaagagaa gctcatgtgc aattggtgca cagcaggaga
1801 aatttctgga ctgttaggat gaatggacgc cttctccccg ttatttaaga tttgtgacct
1861 tgtacata
//