LOCUS AK295780 1175 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57940 complete cds, highly similar to
TRAF-interacting protein.
ACCESSION AK295780
VERSION AK295780.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1175)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1175
/clone="BRHIP3027284"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490404"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 112..555
/codon_start=1
/note="highly similar to TRAF-interacting protein"
/protein_id="BAG58603.1"
/transl_table=1
/translation="MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSR
TCPQCRIQVGKRTIINKLFFDLAQEEENVLDAEFLKNELDNVRAQLSQKDKEKRDSQV
IIDTLRDTLEERNATVVSLQQALGKAEMLCSTLKVGPQVLWVQNS"
BASE COUNT 284 a 304 c 307 g 280 t
ORIGIN
1 aagtcgtgct gcggagccaa atttgaagca agcggaggcg cgggggcgcg tctacgaagc
61 cggacctgta gcagtttctt tggctgcctg ggccccttga gtccagccat catgcctatc
121 cgtgctctgt gcactatctg ctccgacttc ttcgatcact cccgcgacgt ggccgccatc
181 cactgcggcc acaccttcca cttgcagtgc ctaattcagt ggtttgagac agcaccaagt
241 cggacctgcc cacagtgccg aatccaggtt ggcaaaagaa ccattatcaa taagctcttc
301 tttgatcttg cccaggagga ggagaatgtc ttggatgcag aattcttaaa gaatgaactg
361 gacaatgtca gagcccagct ttcccagaaa gacaaggaga aacgagacag ccaggtcatc
421 atcgacactc tgcgggatac gctggaagaa cgcaatgcta ctgtggtatc tctgcagcag
481 gccttgggca aggccgagat gctgtgctcc acactgaaag taggtcctca ggttttatgg
541 gtacagaatt catagggagg tattgcccca gaactggact ccccattctg ggcttatctt
601 ctggttctgc tccagtcaac accttggttt ggggagttgt aaaatagagg caaatcactt
661 cttccccttg cccttccata ctgtacccat ccatcccata agaaaagggc catattggct
721 atacttgtgg gttttgtact aggtagtttg aagagtcaag gccttcccag tacctcacag
781 aggggatgct caactaagac ctcagtgagg ctgggccata tttccgaaag tggttcatac
841 tctactgatg aggccagcct gaagaacctt ccattagcac tctagtcctt ggctgggctg
901 ctctcctgag ccagatcaaa cagcatccta gggaggagca agggcctttg aagtcagctg
961 tgctgagctg accaaccaga tcaaagtctg cagagtgaac agccttagac ccagatgaat
1021 tttgcatcag cctgggttgg tgagcctctt gctctccaag gggcatgaga ggcgattgat
1081 ctgaacccac gattgatatt ctggccttgt aggcaggagc agtccttgct ggatgccatt
1141 tgaaagggaa agggagccat ccttgtgaac agaca
//