LOCUS AK295768 3810 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58150 complete cds, highly similar to
Centaurin-delta 3.
ACCESSION AK295768
VERSION AK295768.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3810)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3810
/clone="BRHIP3025746"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490392"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 70..3651
/codon_start=1
/note="highly similar to Centaurin-delta 3"
/protein_id="BAG58593.1"
/transl_table=1
/translation="MTRSSKDNKFQVITGQRVFVFRTESEAQRDMWCSTLQSCLKEQR
LLGHPRPPQPPRPLRTGMLELRGHKAKVFAALSPGELALYKSEQAFSLGIGICFIELQ
GCSVRETKSRSFDLLTPHRCFSFTAESGGARQSWAAALQEAVTETLSDYEVAEKIWSN
RANRQCADCGSSRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIV
QLFIVLGNDRANRFWAGTLPPGEGLHPDATPGPRGEFISRKYRLGLFRKPHPQYPDHS
QLLQALCAAVARPNLLKNMTQLLCVEAFEGEEPWFPPAPDGSCPGLLPSDPSPGVYNE
VVVRATYSGFLYCSPVSNKAGPSPPRRGRDAPPRLWCVLGAALEMFASENSPEPLSLI
QPQDIVCLGVSPPPTDPGDRFPFSFELILAGGRIQHFGTDGADSLEAWTSAVGKWFSP
LSCHQLLGPGLLRLGRLWLRSPSHTAPAPGLWLSGFGLLRGDHLFLCSAPGPGPPAPE
DMVHLRRLQEISVVSAADTPDKKEHLVLVETGRTLYLQGEGRLDFTAWNAAIGGAAGG
GGTGLQEQQMSRGDIPIIVDACISFVTQHGLRLEGVYRKGGARARSLRLLAEFRRDAR
SVKLRPGEHFVEDVTDTLKRFFRELDDPVTSARLLPRWREAAELPQKNQRLEKYKDVI
GCLPRVNRRTLATLIGHLYRVQKCAALNQMCTRNLALLFAPSVFQTDGRGEHEVRVLQ
ELIDGYISVFDIDSDQVAQIDLEVSLITTWKDVQLSQAGDLIMEVYIEQQLPDNCVTL
KVSPTLTAEELTNQVLEMRGTAAGMDLWVTFEIREHGELERPLHPKEKVLEQALQWCQ
LPEPCSASLLLKKVPLAQAGCLFTGIRRESPRVGLLRCREEPPRLLGSRFQERFFLLR
GRCLLLLKEKKSSKPEREWPLEGAKVYLGIRKKLKPPTPWGFTLILEKMHLYLSCTDE
DEMWDWTTSILKAQHDDQQPVVLRRHSSSDLARQKFGTMPLLPIRGDDSGATLLSANQ
TLPMKSSQGSVEEQEELEEPVYEEPVYEEVGAFPELIQDTSTSFSTTREWTVKPENPL
TSQKSLDQPFLSKSSTLGQEERPPEPPPGPPSKSSPQARGSLEEQLLQELSSLILRKG
ETTAGLGSPSQPSSPQSPSPTGLPTQTPGFPTQPPCTSSPPSSQPLT"
BASE COUNT 762 a 1154 c 1126 g 768 t
ORIGIN
1 atgggtcatt gagctctctc tctccaggac cccttcccta agggtgtgat acctttgact
61 gccattgaga tgacccgcag cagcaaggac aacaagttcc aggtcatcac cggccagagg
121 gtgttcgtgt tccgcacaga gagcgaggct cagcgggaca tgtggtgctc cacgctgcag
181 tcctgtctga aggagcagcg cctcctgggc cacccccggc ccccccaacc accccgaccc
241 ctccgcacgg gcatgctgga gctgcgtgga cacaaggcca aggtgtttgc tgccttgagc
301 cctggagagc tggcactgta caagagtgag caggccttct ctctgggcat cgggatctgc
361 ttcatcgaac tgcagggctg cagcgtccgg gagaccaaga gtcgaagctt tgacctgctc
421 acaccccatc gctgcttcag cttcacagcc gagtctgggg gtgctcggca gagctgggcg
481 gccgctctgc aggaagcagt aaccgagacc ctgtctgact acgaggtggc tgagaagatc
541 tggtctaatc gggccaaccg gcagtgtgcg gactgtgggt cctcccgccc agattgggct
601 gctgtcaatt tgggggtggt catctgcaag cagtgtgcag gtcagcaccg ggccctgggt
661 tctgggatct ccaaggtgca gagcctgaag ctggacacga gtgtctggag taatgagata
721 gtacagttat tcattgtcct gggaaatgat cgtgccaacc gcttctgggc agggacccta
781 cccccaggtg agggactaca tccagatgcg acccctggcc cccggggaga gttcatctcc
841 cgaaagtacc gtctgggtct cttccggaag ccccaccctc agtacccaga tcatagccag
901 cttctccagg cactgtgtgc agctgtggca agacccaacc tgctgaagaa catgacccag
961 ctcctctgtg ttgaggcctt tgaaggcgag gagccctggt tccccccagc ccctgatggc
1021 agctgccctg gcctcttgcc ctcagacccc tcccctggtg tgtacaatga ggtggtggtg
1081 cgtgctactt acagcggctt cctgtactgc agtcccgtca gcaacaaagc tggaccctca
1141 ccccctcgca ggggccggga tgctcccccg cgcctttggt gtgtgctggg agcagctctg
1201 gaaatgtttg catcggaaaa cagccctgaa cccctcagcc tcatacagcc ccaggatatt
1261 gtatgtctgg gtgtgagccc cccacccact gacccaggtg acaggttccc cttttccttt
1321 gagctcatcc tcgctggggg gaggatccag cattttggca cagatggagc tgacagtctg
1381 gaggcctgga ctagtgctgt gggcaagtgg ttctccccgc tgagctgcca ccagctgctg
1441 ggccccgggc tgctgcggct gggccgccta tggctgcggt ccccctccca tacagccccg
1501 gcccctggtc tctggctgtc agggtttggc ctccttcgtg gtgaccacct cttcctgtgc
1561 tcagcgccgg gcccaggccc cccagcccct gaggacatgg tgcatctgcg gcggctacag
1621 gagatcagtg tggtttctgc agctgacacc ccagataaga aagagcattt ggtcctggtg
1681 gagacaggaa ggaccctgta tctgcaagga gagggccggc tggacttcac ggcatggaac
1741 gcagccattg ggggcgcggc tggtgggggc ggcacagggc tgcaggagca gcagatgagc
1801 cggggtgaca tccccatcat cgtggatgcc tgcatcagtt ttgttaccca gcatgggctc
1861 cggctggaag gtgtataccg gaaagggggc gctcgtgccc gcagcctgag actcctggct
1921 gagttccgtc gggatgcccg gtcggtgaag ctccgaccag gggagcactt tgtggaggat
1981 gtcactgaca cactcaaacg cttctttcgt gagctcgatg accctgtgac ctctgcacgg
2041 ttgctgcctc gctggaggga ggctgctgag ctgccccaga agaatcagcg cctggagaaa
2101 tataaagatg tgattggctg cctgccgcgg gtcaaccgcc gcacactggc caccctcatt
2161 gggcatctct atcgggtgca gaaatgtgcg gctctaaacc agatgtgcac gcggaacttg
2221 gctctgctgt ttgcacccag cgtgttccag acggatgggc gaggggagca cgaggtgcga
2281 gtgctgcaag agctcattga tggctacatc tctgtctttg atatcgattc tgaccaggta
2341 gctcagattg acttggaggt cagtcttatc accacctgga aggacgtgca gctgtctcag
2401 gctggagacc tcatcatgga agtttatata gagcagcagc tcccagacaa ctgtgtcacc
2461 ctgaaggtgt ccccaaccct gactgctgag gagctgacta accaggtact ggagatgcgg
2521 gggacagcag ctgggatgga cttgtgggtg acttttgaga ttcgcgagca tggggagctg
2581 gagcggccac tgcatcccaa ggaaaaggtc ttagagcagg ctttacaatg gtgccagctc
2641 ccagagccct gctcagcttc cctgctcttg aaaaaagtcc ccctggccca agctggctgc
2701 ctcttcacag gtatccgacg tgagagccca cgggtggggc tgttgcggtg tcgtgaggag
2761 ccacctcgct tgctgggaag ccgcttccag gagaggttct ttctgctgcg tggccgctgc
2821 ctgctgctgc tcaaggagaa gaaaagctct aaaccagaac gggagtggcc tttggaaggt
2881 gccaaggtct acctgggaat ccgcaagaag ttaaagcccc caacaccgtg gggcttcaca
2941 ttgatactag agaagatgca cctctacttg tcctgcactg acgaggatga aatgtgggat
3001 tggaccacca gcatccttaa agcccagcac gatgaccagc agccagtggt cttacgacgc
3061 cattcctcct ctgaccttgc ccgtcagaag tttggcacta tgcctttgct gcctatccgt
3121 ggggatgaca gtggagccac cctcctctct gccaatcaga ccctgccaat gaagtcatcc
3181 caggggtctg tggaggagca agaggagctg gaggagcctg tgtacgagga gccagtgtat
3241 gaggaagtag gggccttccc tgagttgatc caggacactt ctacctcctt ctccaccaca
3301 cgggagtgga cagtgaagcc agagaacccc ctcaccagcc agaagtcatt ggatcaaccc
3361 tttctctcca agtcaagcac ccttggccag gaggagaggc cacctgagcc ccctccaggc
3421 cccccttcaa agagcagtcc ccaggcacgg gggtccctag aggaacagct gctccaggag
3481 ctcagcagcc tcatcctgag gaaaggagag accactgcag gcctgggaag tccttcccag
3541 ccatccagcc cccaatcccc cagccccact ggccttccaa cacagacacc tggcttcccc
3601 acccaacccc catgcacttc cagtccaccc tccagccagc ccctcacatg accctaggac
3661 cagcagtctg agagggtagg taccagaaga cccagaaact cttatcgtgg cactgttgca
3721 gcttcctctg ccctggctgg aaagactcca gaatccagtg tggtgctgtg gaaggagcac
3781 tggactaaag gcttcagtgg ctgcgtgtcc
//