LOCUS AK295761 3664 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53573 complete cds, highly similar to Myosin
Ic.
ACCESSION AK295761
VERSION AK295761.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3664)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3664
/clone="BRHIP3024816"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490385"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 232..3351
/codon_start=1
/note="highly similar to Myosin Ic"
/protein_id="BAH12181.1"
/transl_table=1
/translation="MALGSDGVRVTMESALTARDRVGVQDFVLLENFTSEAAFIENLR
RRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRA
LRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGAVRDRLLQSNPVLEAF
GNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQ
LLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKALTVIDFTEDE
VEDLLSIVASVLHLGNIHFAANEESNAQVTTENQLKYLTRLLSVEGSTLREALTHRKI
IAKGEELLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTV
LGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYF
NNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQR
TRKSLGRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDRSE
LSDKKRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKY
LGLLENLRVRRAGFAYRRKYEAFLQRYKSLCPETWPTWAGRPQDGVAVLVRHLGYKPE
EYKMGRTKIFIRFPKTLFATEDALEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICI
QSWWRGTLGRRKAAKRKWAAQTIRRFIRGFVLRHAPRCPENAFFLDHVRTSFLLNLRR
QLPQNVLDTSWPTPPPALREASELLRELCIKNMVWKYCRSISPEWKQQLQQKAVASEI
FKGKRDNYPQSVPRLFISTRLGTDEISPRVLQALGSEPIQYAVPVVKYDRKGYKPRSR
QLLLTPNAVVIVEDAKVKQRIDYANLTGISVSSLSDSLFVLHVQRADNKQKGDVVLQS
DHVIETLTKTALSANRVNSININQGSITFAGGPGRDGTIDFTPGSELLITKAKNGHLA
VVAPRLNSR"
BASE COUNT 803 a 1080 c 1085 g 696 t
ORIGIN
1 aaatctgggc ctttcgtggt cagaggacac cggcggcccc tttgggatcc acccccaatc
61 accaccacct tgttcttctc tgaccctgga tactctgggt gtccattttt tggagccctg
121 agaccctgtt tgaagaggga tccatctcag ccctggttgt ggggcgaggg tcttgctcag
181 cctgcaccac cctccaccct ccagtaggac ccagaggcag ctgggctttc catggccctg
241 ggcagtgacg gggttcgggt gaccatggag agtgcgctca ccgcccgtga ccgggtgggg
301 gtgcaggatt tcgtgctgct ggagaacttc accagcgagg ccgccttcat cgagaacctg
361 cggcggcgat ttcgggagaa tctcatctac acctacattg gccccgtcct ggtctctgtc
421 aatccctacc gggacctgca gatctacagc cggcagcata tggagcgtta ccgtggcgtc
481 agcttctatg aagtgccccc tcacctgttt gccgtggcgg acactgtgta ccgagcactg
541 cgcacggagc gtcgggacca ggctgtgatg atctctgggg agagcggggc aggcaagacc
601 gaggccacca agaggctgct gcagttctat gcagagacct gcccagcccc cgagcgcgga
661 ggtgccgtgc gggaccggct gctacagagc aacccggtgc tggaggcctt tggaaatgcc
721 aagaccctcc ggaacgataa ctccagcagg ttcgggaagt acatggatgt gcagtttgac
781 ttcaagggtg cccccgtggg tggccacatc ctcagttacc tcctggaaaa gtcacgagtg
841 gtgcaccaga atcatgggga gcggaacttc cacatcttct accagctgct ggaggggggc
901 gaggaggaga ctcttcgcag gctgggcttg gaacggaacc cccagagcta cctgtacctg
961 gtgaagggcc agtgtgccaa agtctcctcc atcaacgaca agagtgactg gaaggtcgtc
1021 aggaaggctc tgacagtcat tgatttcacc gaggatgaag tggaggacct gctgagcatc
1081 gtggccagcg tccttcattt gggcaacatc cactttgctg ccaacgagga gagcaatgcc
1141 caggtcacca ccgagaacca gctcaagtat ctgaccaggc tcctcagcgt ggaaggctcg
1201 acgctgcgag aagccctgac acacaggaag atcatcgcca agggggagga gctcctgagc
1261 ccgctgaacc tggagcaggc cgcgtacgca cgagacgccc tcgccaaggc tgtgtacagc
1321 cgcactttta cctggctcgt cgggaagatc aacaggtcgc tggcctccaa ggacgtggag
1381 agccccagct ggcggagcac cacggttctc gggctcctgg atatttatgg ctttgaagtg
1441 tttcagcata acagctttga gcagttctgc atcaattact gcaacgagaa gctgcagcag
1501 ctcttcatcg agctcacgct caagtcggag caggaggagt acgaggcaga gggcatcgcg
1561 tgggagcccg tccagtattt caacaacaaa atcatctgtg atctggtgga ggagaagttt
1621 aagggcatca tctcgatttt ggatgaggag tgtctgcgcc ccggggaggc cacagacctg
1681 accttcctgg agaagctgga ggatactgtc aagcaccatc cacacttcct gacgcacaag
1741 ctggctgacc agcggaccag gaaatctctg ggccgagggg aattccgcct tctgcactat
1801 gcgggggagg tgacctacag cgtgaccggg tttctggaca aaaacaatga ccttctcttc
1861 cggaacctta aggagaccat gtgtagctca aagaatccca ttatgagcca gtgctttgac
1921 cggagcgagc tcagtgacaa gaagcggcca gagacggtcg ccacccagtt caagatgagc
1981 ctcctgcagc tggtggagat cctgcagtct aaggagcccg cctacgtccg ctgcatcaaa
2041 cccaatgatg ccaaacagcc cggccgcttt gacgaggtgc tgatccgcca ccaggtgaag
2101 tacctggggc tgttggaaaa cctgcgcgtg cgcagagccg gctttgccta tcgccgcaaa
2161 tacgaagctt tcctgcaaag gtacaagtca ctgtgcccag agacgtggcc cacgtgggca
2221 ggacggccgc aggatggggt ggctgtgctg gtccgacacc tgggctacaa gccagaagag
2281 tacaagatgg gcaggaccaa gatcttcatc cgcttcccca agaccctgtt tgccacagag
2341 gatgccctgg aggtccggcg gcagagcctg gccacaaaga tccaagctgc ctggaggggc
2401 tttcactggc ggcagaaatt cctccgggtg aagagatcag ccatctgcat ccagtcgtgg
2461 tggcgtggaa cactgggccg gaggaaggca gccaagagga agtgggcggc acagaccatc
2521 cggcggttca tccgaggctt cgtcctgcgc cacgcccccc gctgccccga gaacgccttc
2581 ttcctggacc atgtgcgcac ctcttttttg ctaaacctga ggcggcagct gccccagaat
2641 gtcctggaca cctcgtggcc cacgccccca cctgccctgc gtgaggcctc agagcttctg
2701 cgggagttgt gcataaagaa catggtgtgg aaatactgcc ggagtatcag ccctgagtgg
2761 aagcagcagc tacagcagaa ggccgtggct agtgagatct tcaagggcaa gagggataat
2821 taccctcaga gtgtacccag gctcttcatc agcactcggc ttggtacaga tgagatcagc
2881 ccccgagtgc tgcaggcctt gggctctgag cccattcagt atgcggtgcc tgttgtgaaa
2941 tacgaccgca agggctacaa gcctcgctcc cggcagctgc tgctcacgcc caacgccgtc
3001 gtcatcgtgg aggacgccaa agtcaagcag aggattgatt acgccaacct gaccggaatc
3061 tctgtcagca gcctgagcga cagtcttttt gtgcttcatg tacagcgtgc ggacaataag
3121 caaaagggag atgtggtgct gcagagtgac cacgtgattg agacgctgac caagacagcc
3181 ctcagtgcca accgcgtgaa cagcatcaac atcaaccagg gcagcatcac gtttgcaggg
3241 ggccccggca gggatggcac cattgacttc acacccggct cggagctgct catcaccaag
3301 gccaagaacg ggcacctggc tgtggtcgcc ccacggctga attctcggtg ataaaggcgc
3361 ccactggacc ctcccaacgc ccaatgcttt gcttttctcc tcctcccctt cccagttacc
3421 aaagactcga acttccagac agggacccag ggacaccccg aagcccacct gcaatctccc
3481 acctcctgcc catccctctc ttgagggagc agcaggggcc aggagctacc ccaggagtgg
3541 gccaggccgg gccacagcaa taggaaagcc agggccagag cgagccatgc cagccctact
3601 gccgatgcca aatatttgag agaagggaac ttttgctgag gttttctctg aggttttttt
3661 gatg
//