LOCUS AK295747 3864 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55380 complete cds, highly similar to Protein
kinase C-binding protein 1.
ACCESSION AK295747
VERSION AK295747.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3864)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3864
/clone="BRHIP3022710"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490371"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 83..3808
/codon_start=1
/note="highly similar to Protein kinase C-binding protein
1"
/protein_id="BAH12176.1"
/transl_table=1
/translation="MVFLEEFEARSCLAEEEIKTEQEVVEGMDISTRSKDPGSAERTA
QKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTT
DPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI
TVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFH
PMDLCTLEKNTKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEM
NEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARF
FGQHDRAWVPINNCYLMFKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPF
RTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRR
ISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKT
GQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQ
STPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDS
SDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPAS
EKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESEL
VIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTS
AAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSS
QKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLV
TSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIY
NDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRL
IAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKS
CTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKSKESGS
TLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQPHPNYPAQKYHSRSNKS
SWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD"
BASE COUNT 1147 a 1040 c 957 g 720 t
ORIGIN
1 gtcacatggc tcagtagcca ttagccatag cttgattttg caaactggca agggcctggc
61 acacctttcc ttccaccagg gcatggtgtt tctggaagag tttgaagcta gatcctgctt
121 ggctgaagag gaaataaaaa cagaacagga ggtggtagag ggcatggata tctctactcg
181 ctccaaagat cctggctctg cagagagaac agcccagaaa agaaagttcc ccagccctcc
241 acattcttcc aatggccact cgccgcagga cacatcaaca agccccatta aaaagaaaaa
301 gaaacctggc ttactgaaca gtaacaataa ggagcagtca gaactaagac atggtccgtt
361 ttactatatg aagcagccac tcaccacaga ccctgttgat gttgtaccgc aggatggacg
421 gaatgatttc tactgctggg tttgtcaccg ggaaggccaa gtcctttgct gtgagctctg
481 tccccgggtt tatcacgcta agtgtctgag actgacatcg gaaccagagg gggactggtt
541 ttgtcctgaa tgtgagaaaa ttacagtagc agaatgcatc gagacccaga gtaaagccat
601 gacaatgctc accattgaac agttatccta cctgctcaag tttgccattc agaaaatgaa
661 acagccaggg acagatgcat tccagaagcc cgttccattg gaacagcacc ctgactatgc
721 ggaatacatc ttccatccaa tggacctttg tacattggaa aagaatacga aaaagaaaat
781 gtatggctgc acagaagcct tcctggctga tgcaaagtgg attttgcaca actgcatcat
841 ttataatggg ggaaatcaca aattgacgca aatagcgaaa gtagtcatca aaatctgtga
901 acatgagatg aatgaaatcg aagtatgtcc agaatgttat ctagctgctt gccaaaaacg
961 agataactgg ttttgtgagc cttgtagcaa tccacatcct ttggtctggg ccaaactgaa
1021 ggggtttcca ttctggcctg caaaagctct aagggataaa gacgggcagg tcgatgcccg
1081 attctttgga caacatgaca gggcctgggt tccaataaat aattgctacc tcatgtttaa
1141 agaaattcct ttttctgtga aaaagactaa gagcatcttc aacagtgcca tgcaagagat
1201 ggaggtttac gtggagaaca tccgcaggaa gtttggggtt tttaattact ctccatttag
1261 gacaccctac acacccaaca gccagtatca aatgctgctc gatcccacca accccagcgc
1321 cggcactgcc aagatagaca agcaggagaa ggtcaagctc aactttgaca tgacggcatc
1381 ccccaagatc ctgatgagca agcctgtgct gagtgggggc acaggccgcc ggatttcctt
1441 gtcggatatg ccgcgctccc ccatgagcac aaactcttct gtgcacacgg gctccgacgt
1501 ggagcaggat gctgagaaga aggccacgtc gagccacttc agtgcgagcg aggagtccat
1561 ggacttcctg gataagagca cagcttcacc agcctccacc aagacgggac aagcagggag
1621 tttatccggc agcccaaagc ccttctctcc tcaactgtca gctcctatca cgacgaaaac
1681 ggacaaaacc tccaccaccg gcagcatcct gaatcttaac ctggatcgaa gcaaagctga
1741 gatggatttg aaggagctga gcgagtcggt ccagcaacag tccacccctg ttcctctcat
1801 ctctcccaag cgccagattc gtagcaggtt ccagctgaat cttgacaaga ccatagagag
1861 ttgcaaagca caattaggca taaatgaaat ctcggaagat gtctatacgg ccgtagagca
1921 cagcgattcg gaggattctg agaagtcaga tagtagcgat agtgagtata tcagtgatga
1981 tgagcagaag tctaagaacg agccagaaga cacagaggac aaagaaggtt gtcagatgga
2041 caaagagcca tctgctgtta aaaaaaagcc caagcctaca aacccagtgg agattaaaga
2101 ggagctgaaa agcacgtcac cagccagcga gaaggcagac cctggagcag tcaaggacaa
2161 ggccagccct gagcctgaga aggacttttc cgaaaaggca aaaccttcac ctcaccccat
2221 aaaggataaa ctgaagggaa aagatgagac ggattcccca acagtccatt tgggcctgga
2281 ctctgattca gagagcgaac ttgtcataga tttaggagaa gaccattctg ggcgggaggg
2341 tcgaaaaaat aagaaggaac ccaaagaacc atctcccaaa caggatgttg taggtaaaac
2401 tccaccatcc acgacggtgg gcagccattc tcccccggaa acaccggtgc tcacccgctc
2461 ttccgcccaa acttccgcgg ctggcgccac agccaccacc agcacgtcct ccacggtcac
2521 cgtcacggcc ccggcccccg ccgccacagg aagcccagtg aaaaagcaga ggccgctttt
2581 accgaaggag actgccccgg ccgtgcagcg ggtcgtgtgg aactcatcaa gtaagtttca
2641 aacgtcctcc caaaagtggc acatgcagaa gatgcagcgt cagcagcagc agcagcagca
2701 gcaaaaccag cagcagcagc ctcagtcttc ccaggggacg agatatcaga ccagacaggc
2761 tgtgaaagct gtccagcaga aggagatcac acagagccca tccacgtcca ccatcaccct
2821 ggtgaccagc acacagtcat cgcccctggt caccagctcg gggtccatga gcacccttgt
2881 gtcctcagtc aacgctgatc tgcccatcgc cactgcctca gctgatgtcg ccgctgatat
2941 tgccaagtac actagcaaaa tgatggatgc aataaaagga acaatgacag aaatatacaa
3001 cgatctttct aaaaacacta ctggaagcac aatagctgag attcgcaggc tgaggatcga
3061 gatagagaag ctccagtggc tgcaccagca agagctctcc gaaatgaaac acaacttaga
3121 gctgaccatg gcggagatgc ggcagagcct ggagcaggag cgggaccggc tcatcgccga
3181 ggtgaagaag cagctggagt tggagaagca gcaggcggtg gatgagacca agaagaagca
3241 gtggtgcgcc aactgcaaga aggaggccat cttttactgc tgttggaaca ccagctactg
3301 tgactacccc tgccagcaag cccactggcc tgagcacatg aagtcctgca cccagtcagc
3361 tactgctcct cagcaggaag cggatgctga ggtgaacaca gaaacactaa ataagtcctc
3421 ccaggggagc tcctcgagca cacaatcagc accttcagaa acggccagcg cctccaaaga
3481 gaaggagacg tcagctgaga aaagcaagga gagtggctcg acccttgacc tttctggctc
3541 cagagagacg ccctcctcca ttctcttagg ctccaaccaa ggctctgtta gcaaaaggtg
3601 tgacaagcaa cctgcctatg ccccaaccac cacagaccac cagccgcacc ccaactaccc
3661 cgcccagaag taccattccc ggagtaataa atccagttgg agcagcagtg atgagaagag
3721 gggatcgaca cgttccgatc acaacaccag taccagcacg aagagcctcc tcccgaaaga
3781 gtctcggctg gacaccttct gggactagca gtgaatcggg acacaaacca cccaccccat
3841 tgggagaaaa acccagacgc cagg
//