LOCUS AK295743 3458 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56811 complete cds.
ACCESSION AK295743
VERSION AK295743.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3458)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3458
/clone="BRHIP3022545"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490367"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 189..3044
/codon_start=1
/protein_id="BAH12174.1"
/transl_table=1
/translation="MEEACSTLAQIQRLVAEPPKPDVATVDCESETTSVEIASNPEDT
WDSKTWLQKYGLKAQKLSLYDVLADCSFRHADGVVDIKAKPENESVQTSAETNKKTVH
AKYCSRFVHAPWKDGSLVHVNITKEKCKWYSERIHTALARIRRRIKWLQDGSQSLFGR
LHNDCIYILIDTSHSMKSKLDLVKDKIIQFIQEQLKYKSKFNFVKFDGQAVAWREQLA
EVNEDNLEQAQSWIRDIKIGSSTNTLSALKTAFADKETQAIYLLTDGRPDQPPETVID
QVKRFQEIPIYTISFNYNDEIANRFLKEVAALTGGEFHFYNFGCKDPTPPEAVQNEDV
TLLVKEMEQGHSDLEKMQDLYSESLIMDWWYNAEKDGDSKHQKEICSMISTPEKCAKP
QSDVDSTQTSSLNMLKGPWGLSDQKVQKKKVLHAESTKTSLLRSQMSSLRSSACSERK
DGLSNASSRRTALSDKEMSILLAEEWLDDKSSEKVTREGSQVYDHDSSDVSSENWLKT
YGLVAKKLTLMDALSVAAVPHSSTYVPVLDKHVMSKVFDEVFPLAHVCNDTNKMTLIN
PQGAKLNIYKRKVEQAIQSYEKRLNKIVWRALSQEEKEKLDANKPIQYLENKTVLNQA
LERLNWPISLKELSMLESEILAGKMYIQQAMELQEAAKKNYANKAPGEQQKLQGNPTK
KTKSKRPDPLKGQKVIARCDENGFYFPGVVKKCVSRTQALVGFSYGDTKVVSTSFITP
VGGAMPCPLLQVGDYVFAKIVIPKGFDFYVPAIVIALPNKHVATEKFYTVLKCNNRRE
FCPRSALIKISQNKYALSCSHIKSPPIPEDPEVEDVEARNSAFLFWPLKEADTQDSRE
PRREKPRRKKRPAKQPLQQAAPSDSDGSSHGISSHGSCQGTHPEPKTAHLHFPAAGRL
GLSSHAIIATPPPRAALPCTLQATHSSKGLRSVPETL"
BASE COUNT 1002 a 846 c 830 g 780 t
ORIGIN
1 ctgcagtcag tctgattggt tgtggaaaga aaccagtcag aagctgacat gaagttgcaa
61 agtttacacc ttatgcaaac gtttgattga ttgtggaaag caaccagtca gaagtacttt
121 caattttcca tccgccaggc aaaaaaggag ctggagtcag agaggacgtg tttctcgttt
181 ggcaagagat ggaggaagcc tgcagcacgc tggcccagat ccagaggctg gtggccgagc
241 ctcccaagcc cgacgtggcc actgtggact gcgagtcaga aacaacctct gttgagattg
301 catcgaatcc agaagacacc tgggactcta agacatggct gcagaaatat ggcttgaagg
361 cccagaagct atccttgtat gatgtgcttg ccgactgctc tttccgccac gctgatgggg
421 ttgtggatat aaaagccaaa ccggagaatg agtccgtgca gaccagtgcg gagacgaaca
481 agaagacagt ccatgcaaaa tattgcagca ggtttgtcca tgctccctgg aaggatggga
541 gcttggtcca cgtcaacatt accaaagaga agtgcaagtg gtacagtgag agaatccaca
601 cagccctggc ccggatccga aggaggatta aatggctaca ggatgggagt caaagcctct
661 ttggaagatt gcataatgat tgcatctaca ttctcattga cacgtctcac tcaatgaaga
721 gcaaactgga cttggtgaag gacaagatca ttcagttcat acaggaacag ctgaaatata
781 aaagtaagtt taactttgtg aagtttgatg gtcaagcagt tgcttggcgg gaacaacttg
841 ctgaagtcaa tgaagataat ttggaacagg ctcagtcctg gattagagac ataaagattg
901 gaagctccac aaacaccctg agtgccctga aaactgcttt tgctgataaa gaaacacagg
961 caatctacct tctgaccgat gggagacctg atcagccacc tgaaacagtt atagaccagg
1021 tcaaacgttt tcaggaaatt cctatttata ccatctcctt caattacaat gatgagattg
1081 caaacaggtt tttgaaagag gttgctgctt tgactggagg agagttccat ttttataatt
1141 ttggttgcaa ggatcccact cccccagagg ctgttcagaa tgaagatgtg actcttttag
1201 ttaaggaaat ggaacagggt cacagtgatc tggagaagat gcaagacctt tattctgagt
1261 ccttgatcat ggactggtgg tacaatgcag aaaaggatgg agacagcaag catcaaaagg
1321 aaatctgttc tatgatttca accccagaaa agtgtgcaaa gcctcaatct gatgtcgatt
1381 caacacaaac ttcatctctg aatatgttga agggaccatg gggcctttca gatcaaaagg
1441 ttcagaaaaa gaaagtcctt cacgcagaat caaccaaaac cagcctgctc agaagccaga
1501 tgtcctccct caggagctca gcttgcagtg aaaggaagga tggcctctcc aatgccagca
1561 gccggaggac tgctctaagt gacaaagaaa tgagcatctt gctggctgag gagtggctgg
1621 atgacaaatc gtcagaaaag gtgacgcgag aaggaagcca ggtttatgac cacgattctt
1681 cagatgtgtc ttcagaaaac tggctgaaga cctatggctt ggtcgccaag aaactcaccc
1741 tcatggatgc cttgtcagtg gcagcagtcc cgcacagctc cacctatgtt cccgtcctgg
1801 acaagcatgt catgtctaag gtctttgatg aggtgttccc tctggcacat gtgtgcaacg
1861 acacaaataa gatgacatta attaaccccc aaggagccaa actcaatatc tacaagcgaa
1921 aagtggaaca ggcaattcaa tcctatgaaa agcgcttgaa taaaattgtt tggcgagcat
1981 tatctcaaga ggaaaaagaa aagttagatg caaacaaacc aatacagtac ttggaaaaca
2041 aaacagtttt aaaccaggct ttagaacggt tgaattggcc catttcactg aaagagctgt
2101 cgatgctgga aagtgaaatc ctagctggga aaatgtacat ccagcaggcc atggaactcc
2161 aggaggctgc caagaagaat tatgcaaaca aggccccggg agagcaacag aaattgcaag
2221 gaaatccaac aaagaaaacc aaatcaaaaa gaccagatcc cctcaaagga cagaaggtta
2281 ttgcaagatg tgatgaaaat ggcttttatt ttccaggggt tgtgaagaag tgtgtgagcc
2341 gcacccaagc actggtgggc ttcagttacg gagacaccaa ggtcgtgtcc acctccttca
2401 tcacgcctgt ggggggcgcc atgccctgcc cgctgctcca ggttggagat tatgtgtttg
2461 ccaaaattgt gatacccaaa ggatttgact tctatgtccc tgccattgtc atagcacttc
2521 ccaataagca tgtggccaca gaaaaattct acacagtttt gaagtgtaac aaccggagag
2581 aattttgccc tcggagtgca cttattaaga tcagccaaaa caagtatgcg ctctcttgct
2641 ctcatataaa gtcaccccca attcctgagg atccagaagt agaggatgtg gaggcgagga
2701 actctgcttt cctcttctgg ccactgaaag aagcggacac gcaggattcc agagagccaa
2761 gacgagagaa gcccaggagg aaaaagaggc ccgccaagca gccactccag caggcggcgc
2821 cctcggactc ggacggctcc tcccacggca tcagctccca tgggtcctgc caggggacac
2881 accccgagcc caagacagcc cacctccact tccccgcggc cgggcgtcta ggactcagca
2941 gccacgccat cattgccaca cctccacctc gagcagccct gccctgtact ctccaagcca
3001 cccacagcag caaagggctg aggagcgtcc ctgagacact ttaaggccgt ctggtggcag
3061 ctatgtttaa gagaccagcg tccttccagg ctgttcagac ctcagcgttg acactgaaac
3121 tggcccctcc gcggaggtaa ggccgccctc cgcgccgcct atgcctgccc tgtctgtagc
3181 aaagactcct ctcccctcca tccctgctgc ctcccctacc cgtttgacga cttggttctg
3241 gctttttctg actgttcttt atcctgtttt ccccctgcac tcacaaaatt gtattccatc
3301 ttctggtaga cgccccaccc ccagaagttt taacctgaag gatgactgtc acaggacttt
3361 caaattgttt agcagtcagc atagtcagga tccaagcccg caatcttgtt ttaaattaat
3421 tatcacatct aaattagaga atttgtcacc caatatta
//