LOCUS AK295738 2162 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56376 complete cds, highly similar to
Myotubularin-related protein 1 (EC 3.1.3.-).
ACCESSION AK295738
VERSION AK295738.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2162
/clone="BRHIP3021561"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490362"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 269..1984
/codon_start=1
/note="highly similar to Myotubularin-related protein 1
(EC 3.1.3.-)"
/protein_id="BAH12171.1"
/transl_table=1
/translation="MEEAPLFPGESIKAIVKDVMYICPFMGAVSGTLTVTDFKLYFKN
VERDPHFILDVPLGVISRVEKIGAQSHGDNSCGIEIVCKDMRNLRLAYKQEEQSKLGI
FENLNKHAFPLSNGQALFAFSYKEKFPINGWKVYDPVSEYKRQGLPNESWKISKINSN
YEFCDTYPAIIVVPTSVKDDDLSKVAAFRAKGRVPVLSWIHPESQATITRCSQPLVGP
NDKRCKEDEKYLQTIMDANAQSHKLIIFDARQNSVADTNKTKGGGYESESAYPNAELV
FLEIHNIHVMRESLRKLKEIVYPSIDEARWLSNVDGTHWLEYIRMLLAGAVRIADKIE
SGKTSVVVHCSDGWDRTAQLTSLAMLMLDSYYRTIKGFETLVEKEWISFGHRFALRVG
HGNDNHADADRSPIFLQFVDCVWQMTRQFPSAFEFNELFLITILDHLYSCLFGTFLCN
CEQQRFKEDVYTKTISLWSYINSQLDEFSNPFFVNYENHVLYPVASLSHLELWVNYYV
RWNPRMRPQMPIHQNLKELLAVRAELQKRVEGLQREVATRAVSSSSERGSSPSHSATS
VHTSV"
BASE COUNT 598 a 448 c 549 g 567 t
ORIGIN
1 atggggtggg gaggaattgc taaaatgcac ggaattgctc ctgcttcaag atgtcaagac
61 cgagggagct tgagctgttc tatacctttt ccgggaagga caactgagtc ccacaggatc
121 acatgttgaa tggtgtaaac agcttatagc tgctacaatt tctagtcaga tttcaggttc
181 agtgacatca gaaaatgtgt ccagagatta caaggttttc aggaggcctg atctaagggc
241 tctaagggat ggaaataagc tggcacagat ggaagaggct ccacttttcc caggagaatc
301 aattaaagcc attgtgaaag atgtcatgta tatctgccca tttatgggag cagtgagtgg
361 aaccctgaca gtgacggact ttaagctgta cttcaaaaat gtcgagaggg acccgcattt
421 tatccttgat gttccccttg gagtgatcag cagagtggag aagattggag cacagagcca
481 tggagacaat tcctgtggta tagagatagt gtgcaaggat atgaggaact tgcggcttgc
541 ttataaacag gaagaacaga gtaaactagg gatatttgaa aacctcaaca aacatgcatt
601 tcctctttct aacggacagg cactatttgc attcagctat aaagaaaaat ttccaattaa
661 tggctggaaa gtttatgatc cagtatctga atataagaga cagggcttgc caaatgagag
721 ttggaaaata tccaaaataa acagtaatta tgagttctgt gacacctacc ctgccatcat
781 tgttgtgcca actagcgtaa aagatgatga cctttcaaaa gtggcagctt ttcgagcaaa
841 aggcagagtc cctgtgttgt catggattca tccggaaagt caagcaacga ttacccgttg
901 cagccagcca cttgtgggtc ccaatgataa gcgctgcaaa gaggatgaaa aatacttgca
961 aacaataatg gatgctaacg cacagtcaca caagcttatc atctttgatg ctcgacaaaa
1021 cagtgtcgct gataccaaca agacaaaggg tggaggatat gaaagtgaaa gtgcttaccc
1081 aaatgcagag cttgtgttct tggagatcca caacattcat gtcatgcgag agtcactacg
1141 caaattaaaa gagattgtgt acccttcgat cgatgaggcg cggtggctct ccaatgtgga
1201 tgggacgcat tggctggaat atataaggat gctgcttgct ggggcagtaa gaattgctga
1261 taaaatagaa tctgggaaaa catctgtggt ggtgcattgc agcgacggtt gggaccgaac
1321 agcccagctc acatctctgg ctatgctaat gttggacagt tactacagga ccattaaagg
1381 atttgaaact ctcgtagaaa aggagtggat aagctttgga cacaggtttg cactgcgagt
1441 gggccatggt aatgacaacc atgcggatgc tgaccgatct cccatatttc tgcagtttgt
1501 tgattgtgtt tggcaaatga caaggcagtt tccttcagca ttcgagttta atgagctatt
1561 cttgattaca attttggatc acctttatag ctgtcttttt gggacctttt tgtgcaactg
1621 tgaacagcag cgattcaaag aggatgtata tacaaagacg atatctttat ggtcgtatat
1681 caatagccag ctagacgagt tttctaatcc cttctttgtg aattatgaaa accacgtgtt
1741 atatcctgtt gctagtctga gtcatttgga attgtgggta aattattatg tacgatggaa
1801 tccacggatg agacctcaga tgcccattca ccagaatctc aaggagctgc tggccgtcag
1861 ggcggagctg cagaagcgtg tggagggtct acagcgggag gtggccacgc gcgccgtctc
1921 atcctcatct gagcggggct cctcgccctc ccactccgcc acctccgtcc acacctcggt
1981 ctgatgggcg aggtcagcct gctgctccac tgtctcccgg tggctcagga aagggacctg
2041 gcgatcactg ttatggctgt agcttgtgat cttgtctttt aggattaggc ccagggacca
2101 tttgtgtggc taggtgacag ctcccactgt tggcaaccgt taccctcctg tcagcggttt
2161 ca
//