LOCUS AK295727 3712 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61277 complete cds, highly similar to Myosin-binding protein C, slow-type. ACCESSION AK295727 VERSION AK295727.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3712) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3712 /clone="BRHIP3019901" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000490351" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 101..3463 /codon_start=1 /note="highly similar to Myosin-binding protein C, slow-type" /protein_id="BAG58568.1" /transl_table=1 /translation="MPEPTKKEDWTLVETPPGEEQAKQNANSQLSILFIEKPQGGTVK VGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQ IIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDIRSAFKRSGEGQEDAG ELDFSGLLKRREVKQQEEEPQVDVWELLKNAKPSEYEKIAFQYGITDLRGMLKRLKRM RREEKKSAAFAKILDPAYQVDKGGRVRFVVELADPKLEVKWYKNGQEIRPSTKYIFEH KGCQRILFINNCQMTDDSEYYVTAGDEKCSTELFVREPPIMVTKQLEDTTAYCGERVE LECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT GGQSSAKLSVDLKPLKILTPLTDQTVNLGKEICLKCEISENIPGKWTKNGLPVQESDR LKVVHKGRIHKLVIANALTEDEGDYVFAPDAYNVTLPAKVHVIDPPKIILDGLDADNT VTVIAGNKLRLEIPISGEPPPKAMWSRGDKAIMEGSGRIRTESYPDSSTLVIDIAERD DSGVYHINLKNEAGEAHASIKVKVVDFPDPPVAPTVTEVGDDWCIMNWEPPAYDGGSP ILGYFIERKKKQSSRWMRLNFDLCKETTFEPKKMIEGVAYEVRIFAVNAIGISKPSMP SRPFVPLAVTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIV ANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKEIIEPPKIRIP RHLKQTYIRRVGEAVNLVIPFQGKPRPELTWKKDGAEIDKNQINIRNSETDTIIFIRK AERSHSGKYDLQVKVDKFVETASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDD GNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSED ATMTKESAVIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGYNATLNCSVRGNP KPKITWMKNKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIEC KLEVKVIYQGVNTPGQPVFLEGQQQSLHNKDF" BASE COUNT 1137 a 777 c 914 g 884 t ORIGIN 1 gtcacaccga cctgcaccat ctctcgcctg cctgtggggt ttctgtcaac tagtcgtgga 61 gggaaggaga ctctttaaag aataacatct tattgtggcc atgccagaac ccactaagaa 121 agaggactgg acccttgtcg aaactcctcc tggggaggaa caagccaagc agaatgccaa 181 ctcccagctg tccatcttgt tcattgaaaa acctcaagga ggaacagtga aagttggtga 241 agatatcacc ttcatagcca aagtcaaggc tgaagatctt ctgagaaaac ccactatcaa 301 atggttcaaa ggaaaatgga tggacctggc cagcaaagcc gggaagcacc ttcagctgaa 361 ggaaaccttt gagaggcaca gtcgggtgta cacatttgag atgcagatca tcaaggccaa 421 agataacttt gcaggaaatt acagatgcga ggtcacctat aaggataagt ttgacagctg 481 ttcatttgat cttgaagtgc acgaatctac tgggactact ccaaacattg acatcagatc 541 tgctttcaag agaagtggag aaggtcaaga ggatgcagga gaacttgact ttagtggtct 601 cctgaaacgt agggaggtga agcagcagga ggaagaaccc caggtggacg tatgggagtt 661 gctgaagaac gcgaaaccca gtgagtacga gaagatcgcc ttccagtatg gaatcacaga 721 cctgcgcggc atgctcaagc gactcaagcg catgcgcaga gaggagaaga agagcgcagc 781 ttttgcaaaa attcttgatc ctgcatatca ggttgacaaa ggaggcagag tgaggtttgt 841 tgtggagctg gcagatccaa agttggaggt gaaatggtat aaaaatggtc aagaaattcg 901 acccagtacc aaatacatct ttgaacacaa aggatgccag agaatcctgt ttatcaataa 961 ctgtcagatg acagatgatt cagagtatta tgtgacagcc ggtgatgaga aatgttccac 1021 tgagctcttc gtaagagagc ctccaattat ggtgaccaaa cagctggaag atacaactgc 1081 ttattgtggg gagagagtgg aattagaatg tgaggtgtct gaagatgatg ccaatgtaaa 1141 atggtttaag aatggtgaag agattatccc tggtccaaaa tcaagatacc gaattagagt 1201 tgagggtaaa aaacacatct tgatcataga gggagcaaca aaggctgatg ctgcagaata 1261 ttcagtaatg acaacaggag gacaatcatc tgctaaactt agtgttgact tgaaacctct 1321 gaagattttg actcctctga ctgatcagac tgtaaatctt ggaaaagaaa tctgcctgaa 1381 gtgtgaaatc tctgaaaaca taccaggaaa atggactaaa aatggcctac ctgttcagga 1441 gagtgaccgt ctaaaggtgg ttcacaaggg aaggatccac aagttagtga tagccaatgc 1501 cctcactgaa gatgaaggtg attatgtatt tgcacctgat gcctacaatg ttactctgcc 1561 tgccaaagtt catgttattg atcctcctaa gatcatcctg gatggtcttg atgctgacaa 1621 cacagtgaca gtgattgcag gaaacaagct tcgtcttgag atccccatca gcggagaacc 1681 acctcctaaa gccatgtgga gccggggaga taaggctatt atggaaggca gtggccggat 1741 aagaacagaa tcttaccctg atagcagcac tctggtcatt gatatagctg aaagagatga 1801 ctctggtgtt taccacatca atctgaaaaa cgaagctgga gaggcacatg caagcatcaa 1861 ggttaaagtt gtggacttcc ctgatcctcc agtggcaccg actgtgacag aggtgggaga 1921 tgactggtgt atcatgaact gggagcctcc tgcctacgac ggaggctctc caatcctagg 1981 atattttatt gagaggaaga agaaacaaag ctccaggtgg atgaggctga attttgatct 2041 ctgcaaagaa acaacttttg agcccaagaa gatgattgaa ggtgtggcct atgaggtccg 2101 catctttgca gtcaatgcca ttggcatctc caagcccagt atgccctcca ggccttttgt 2161 tcctttggct gtaacaagcc ctcctactct tctgactgtg gactctgtca ctgacacgac 2221 tgtcacgatg aggtggcgcc ccccagacca cattggtgca gcaggtttag atggctatgt 2281 gctagagtat tgctttgaag gaactgagga ctggatagtt gcaaacaaag atctgattga 2341 caagacgaag ttcaccatca caggtctgcc aacagatgca aagatctttg tgcgtgtgaa 2401 ggctgttaat gcagctggtg ccagcgagcc caagtactat tctcagccca ttctcgtgaa 2461 ggaaatcata gaacctccaa agattcgcat tccaagacac ctgaagcaaa cctatatccg 2521 cagagttgga gaagctgtca atctggttat acctttccag ggaaaaccaa gaccagaatt 2581 aacttggaag aaggatggtg cagaaattga taagaatcaa ataaacattc gcaactctga 2641 gactgataca atcatattta ttagaaaagc agagaggagc cactctggga aatatgatct 2701 gcaagtcaaa gtggacaaat tcgtggagac cgcatcaatt gacatccaga tcattgaccg 2761 tccaggtcca ccccaaattg tgaagattga ggatgtctgg ggagaaaatg tcgctctcac 2821 atggactcca ccaaaggatg atggaaatgc tgctatcaca ggctatacca ttcagaaggc 2881 tgacaagaag agcatggaat ggtttactgt cattgagcat tatcatcgaa ccagtgccac 2941 cattactgaa ttggtcatag ggaatgaata ttacttccgg gtcttttctg aaaacatgtg 3001 tggcctcagt gaggatgcca ccatgactaa agagagtgca gtgatcgcca gggatggtaa 3061 aatctacaaa aatccagtgt atgaagactt tgatttctca gaggcaccca tgtttactca 3121 gcctttggtt aacacctatg ccatagctgg ttacaatgcc accctaaact gcagtgtgag 3181 aggaaatcct aagcctaaaa taacctggat gaaaaacaaa gttgctattg tggatgatcc 3241 aagatacagg atgttcagca accagggagt ctgtaccctg gaaattcgca agcccagccc 3301 ctatgatgga ggcacttact gctgcaaagc agtcaatgac cttgggacag tggagattga 3361 atgcaaactg gaggtgaaag tgatatatca aggagtaaat acccctggac aaccagtctt 3421 cctggagggg cagcaacagt cattgcacaa taaggatttt tgaatgtata atatcatcta 3481 aggtgggctc tccttctgca gactcctctt gcaaggcgta cctccaaaca taattgattc 3541 atatctgcga gacttacact caagcaatcc tgaggaatac tgagggaggg cctggctact 3601 gtctctctgc actctgctgc tttgaaatct ggttgaaatg agaaaaagca ttttctgttt 3661 tcccaccagg cccccaagtg tggtcttttt ctttcctcct aatgttgaag ag //