LOCUS AK295702 1756 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ57116 complete cds, highly similar to Sodium-
and chloride-dependent GABA transporter 1.
ACCESSION AK295702
VERSION AK295702.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1756)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1756
/clone="BRHIP3014615"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490326"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 309..1574
/codon_start=1
/note="highly similar to Sodium- and chloride-dependent
GABA transporter 1"
/protein_id="BAH12161.1"
/transl_table=1
/translation="MVNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAW
ILVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLS
DSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVI
FSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDS
QFCTVEGFITALVDEYPRLLRNRRELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYS
ASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVF
IFSAVQMTPLTMGNYVFPKWGQGVGWLMALSSMVLIPGYMAYMFLTLKGSLKQRIQVM
VQPSEDIVRPENGPEQPQAGSSTSKEAYI"
BASE COUNT 341 a 541 c 459 g 415 t
ORIGIN
1 ctagggtgcc cttgagccgc aaaactgctg tccacgtgga ccgggggtga catcgcacgt
61 ccatctgcca ggacccctgc gtccaaattc cgagacatgg cgaccaacgg cagcaaggtg
121 gccgacgggc agatctccac cgaggcgtgg gccttgcggc tgctgtgcta tcattctggc
181 tgaacatcta ctacatcgtc atcatctcct gggccattta ctacctgtac aactccttca
241 ccacgacact gccgtggaaa cagtgcgaca acccctggaa cacagaccgc tgcttctcca
301 actacagcat ggtcaacact accaacatga ccagcgctgt ggtggagttc tgggagcgca
361 acatgcatca gatgacggac gggctggata agccaggtca gatccgctgg ccactggcca
421 tcacgctggc catcgcctgg atccttgtgt atttctgtat ctggaagggt gttggctgga
481 ctggaaaggt ggtctacttt tcagccacat acccctacat catgctgatc atcctgttct
541 tccgtggagt gacgctgccc ggggccaagg agggcatcct cttctacatc acacccaact
601 tccgcaagct gtctgactcc gaggtgtggc tggatgcggc aacccagatc ttcttctcat
661 acgggctggg cctggggtcc ctgatcgctc tcgggagcta caactctttc cacaacaatg
721 tctacaggga ctccatcatc gtctgctgca tcaattcgtg caccagcatg ttcgcaggat
781 tcgtcatctt ctccatcgtg ggcttcatgg cccatgtcac caagaggtcc attgctgatg
841 tggcggcctc aggccccggg ctggcgttcc tggcataccc agaggcggtg acccagctgc
901 ctatctcccc actctgggcc atcctcttct tctccatgct gttgatgctg ggcattgaca
961 gccagttctg cactgtggag ggcttcatca cagccctggt ggatgagtac cccaggctcc
1021 tccgcaaccg cagagagctc ttcattgctg ctgtctgcat catctcctac ctgatcggtc
1081 tctctaacat cactcagggg ggtatttatg tcttcaaact ctttgactac tactctgcca
1141 gtggcatgag cctgctgttc ctcgtgttct ttgaatgtgt ctctatttcc tggttttacg
1201 gtgtcaaccg attctatgac aatatccaag agatggttgg atccaggccc tgcatctggt
1261 ggaaactctg ctggtctttc ttcacaccaa tcattgtggc gggcgtgttc attttcagtg
1321 ctgtgcagat gacgccactc accatgggaa actatgtttt ccccaagtgg ggccagggtg
1381 tgggctggct gatggctctg tcttccatgg tcctcatccc cgggtacatg gcctacatgt
1441 tcctcacctt aaagggctcc ctgaagcagc gcatccaagt catggtccag cccagcgaag
1501 acatcgttcg cccagagaat ggtcctgagc agccccaggc gggcagctcc accagcaagg
1561 aggcctacat ctagggtggg ggccactcac cgacccgaca ctctcacccc ccgacctggc
1621 tgagtgcgac caccacttga tgtctgagga taccttccat ctcaacctac ctcgagtggc
1681 gagtccagac accatcacca cgcagagagg ggaggtggga ggacagttag acccctgggt
1741 gggccctgcc gtgggc
//