LOCUS AK295677 3795 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56088 complete cds.
ACCESSION AK295677
VERSION AK295677.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3795)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3795
/clone="BRHIP3010826"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490301"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 49..3750
/codon_start=1
/protein_id="BAG58534.1"
/transl_table=1
/translation="MNTKKRGSPARTHSMMSLSVRPQRRLLSARVNRSQSFAGVLGSH
ERGPRSFPVFSPPGPPRKPPALSRVSRMFSVAHPAAKVPQPERLDLVYTALKRGLTAY
LEVHQQEQEKLQGQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKIDELYEAY
CVQRRLRDGAYNMVRAYTTGSPGSREARDSLAEATRGHREYTESMCLLESELEAQLGE
FHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIEGSGKQVWDSEETIFLPLLTE
FLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVTWSPFD
KDDQPSAASSVNKASTVTKRFSTYSQSPPDTPSLREQAFYNMLRRQEELENGTAWSLS
SESSDDSSSPQLSGTARHSPAPRPLVQQPEPLPIQVAFRRPETPSSGPLDEEGAVAPV
LANGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGPSPPTHPAPTHGEHPSPV
PPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGST
YSAITTTHSAPSPLTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTMPSPTH
TTASPTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPT
TSPILINVSPSTSLELATLSSPSKHSDPTLPGTDSLPCSPPVSNSYTQADPMAPRTPH
PSPAHSSRKPLTSPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAVQTPVPTAAGG
SGDRSLEEALGALMAALDDYRGQFPELQGLEQEVTRLESLLMQRQGLTRSRASSLSIT
VEHALESFSFLNEDEDEDNDVPGDRPPSSPEAGAEDSIDSPSARPLSTGCPALDAALV
RHLYHCSRLLLKLGTFGPLRCQEAWALERLLREARVLEAVCEFSRRWEIPASSAQEVV
QFSASRPGFLTFWDQCTERLSCFLCPVERVLLTFCNQYGARLSLRQPGLAEAVCVKFL
EDALGQKLPRRPQPGPGEQLTVFQFWSFVETLDSPTMEAYVTETAEEVLLVRNLNSDD
QAVVLKALRLAPEGRLRRDGLRALSSLLVHGNNKVMAAVSTQLRSLSLGPTFRERALL
CFLDQLEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEE
GQSAHRRLEESLDALPRIFGPGSMASTAF"
BASE COUNT 779 a 1288 c 1033 g 695 t
ORIGIN
1 aaggtccgcg gggggcgagc gcgggtcggg ggccgtcccg gacccaccat gaacaccaag
61 aagagaggga gccccgcgcg gactcactct atgatgtccc tgtcggtgcg gccgcagcgc
121 cgtctgctca gcgcccgggt caataggagc cagtccttcg caggcgtcct cggcagccac
181 gagcgggggc ccaggagttt cccggtcttc agcccgccgg ggcccccacg gaagcccccc
241 gcgctctccc gagtgtccag gatgttttcc gtggctcacc cagccgccaa ggtgccgcag
301 cccgagcggc tggacctggt gtacacggcg ctgaagcggg gcctgacggc ctacttggaa
361 gtgcaccagc aggagcaaga gaaactccag gggcagataa gggagtccaa gaggaattcc
421 cgcttgggct tcctgtatga tctggacaag caagtcaagt ccattgaacg cttcctgcga
481 cgactggagt tccatgccag caagatcgat gagctgtatg aggcatactg tgtccagcgg
541 cgtctccggg atggtgccta caacatggtc cgtgcctaca ccactgggtc cccgggaagc
601 cgagaggccc gggacagcct ggcagaggcc actcgggggc atcgcgagta cacggagagc
661 atgtgtctgc tggagagcga gctggaggca cagctgggcg agtttcatct ccgaatgaaa
721 gggctggctg gcttcgccag gctgtgtgta ggcgatcagt atgagatctg catgaaatat
781 gggcgtcagc gctggaaact acggggccga attgagggta gtggaaagca ggtgtgggac
841 agtgaagaaa ccatctttct ccctctactc acggaatttc tgtctattaa ggtgacagaa
901 ctgaagggcc tggccaacca tgtggttgtg ggcagtgtct cctgtgagac caaggacctg
961 tttgccgccc tgccccaggt tgtggctgtg gatatcaatg accttggtac catcaagctc
1021 agcctggaag tcacatggag ccccttcgac aaggatgacc agccctcagc tgcttcttct
1081 gtcaacaagg cctccacagt caccaagcgc ttctccacct atagccagag cccaccggac
1141 acaccctcac ttcgggaaca ggctttctat aacatgctgc gacggcagga ggagctggag
1201 aatgggacag catggtccct gtcatctgaa tcttcagacg actcatccag cccacagctc
1261 tcaggcactg cccgccactc accagcccct aggcccctgg tgcagcagcc cgagcccctt
1321 cccatccaag ttgccttccg caggcctgag acccccagct ctgggccctt ggatgaggag
1381 ggggccgtgg ccccagtcct ggcaaatggg catgcaccct acagtcggac tctgagccac
1441 atcagtgagg ctagtgtaga tgctgccttg gctgaggctt cagtggaggc cgttggccca
1501 gaaagcctag cctggggacc tagcccacct acacacccag ctcccaccca tggagagcac
1561 cccagtcctg ttcctcctgc cctggaccct ggccactctg ccacaagctc taccctcggt
1621 acaacaggct ctgtccccac atctacagac cctgccccat ctgcacacct agactcagtt
1681 cataagtcca cagactctgg cccttcagaa ctgccaggcc ccactcacac cactacaggc
1741 tctacctata gtgccattac cactacccac agtgctccaa gccccctcac tcacactact
1801 acaggctcca cccacaagcc cataatctct acccttacta ctacaggccc taccctcaat
1861 atcataggcc cagtccagac taccacaagc cccacccaca ctatgccaag ccctacccat
1921 accacagcaa gccccactca tacttccaca agccccaccc atacccccac aagtcccacc
1981 cacaaaacca gtatgtcacc tcccaccact acaagtccta cccccagtgg tatgggccta
2041 gtccagactg ccacaagtcc cacccatcct accacaagcc ccacccatcc caccacaagc
2101 cccatcctta taaatgtaag cccttccact tctctagaac ttgctaccct ctccagcccc
2161 tccaaacact cagaccccac cctcccaggc actgactccc ttccctgtag tcccccagtc
2221 tccaattcct acactcaggc agaccctatg gcccccagaa ctccccaccc aagtcctgcc
2281 cattccagta ggaaacccct cacaagccct gccccagatc cctcagagtc tacggttcag
2341 agtctaagcc ccactccctc acccccaacc cctgcacccc agcattcaga cctttgcctg
2401 gccatggctg tccagacccc agtcccaacg gcagccggag ggtctgggga caggagcctg
2461 gaggaggcac tgggggccct aatggctgcc ctggatgact accgtggcca gtttcctgag
2521 ctgcagggcc tggagcagga ggtgacccgc ctagaaagtc tgctcatgca gagacaaggt
2581 ctgactcgca gccgggcctc cagtctcagc atcactgtgg agcatgcctt ggagagcttc
2641 agcttcctca atgaagacga agatgaagac aatgatgttc ctggggacag gcctccaagc
2701 agcccggagg ctggggctga ggacagcata gactcaccca gtgcccgccc cctcagcacg
2761 gggtgtccag ctctggatgc tgccttggtc cggcacctgt accactgcag tcgcctcctg
2821 ctgaaactgg gcacatttgg gcccctgcgc tgccaggagg catgggccct ggagcggctg
2881 ctgcgggaag cccgagtact ggaggcagta tgcgagttca gcaggcggtg ggagatcccg
2941 gccagctctg cccaggaagt ggtgcagttc tcggcctctc ggcctggctt cctgaccttc
3001 tgggaccagt gcacagagag actcagctgc ttcctctgcc cggtggagcg ggtgcttctc
3061 accttctgca accagtatgg tgcccgcctc tccctgcgcc agccaggctt ggctgaggct
3121 gtgtgtgtga agttcctgga ggatgccctg gggcagaagc tgcccagaag gccccagcca
3181 gggcctggag agcagctcac agtcttccag ttctggagtt ttgtggaaac cttggacagc
3241 cccaccatgg aggcctacgt gactgagacc gctgaggagg tgctactggt gcggaatctg
3301 aactcggatg atcaggctgt tgtgctgaag gccctgagat tggcgcccga ggggcgtctg
3361 cgaagggacg ggctgcgggc cctcagctcc ctgctcgtcc atggcaacaa caaggtcatg
3421 gctgctgtca gcacccagct ccggagcctg tcactgggcc ctaccttccg ggagagggcc
3481 ctcctgtgct tcctggacca gctggaggat gaggacgtgc agactcgagt ggctggctgc
3541 ctggccctag gctgcatcaa ggctcccgag ggcattgagc ccctggtgta cctctgccaa
3601 actgacacag aagctgtgag ggaagctgcc cggcaaagcc tacagcagtg tggagaagag
3661 ggacagtctg cccatcgacg gctggaggag tccctggacg ccctgccccg catctttggg
3721 cctggcagca tggccagcac agcattctaa actattcacc catgggttcc tggtgcccct
3781 ttccccccac tttca
//