LOCUS AK295661 5792 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58990 complete cds, highly similar to
Ankyrin-3.
ACCESSION AK295661
VERSION AK295661.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5792)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..5792
/clone="BRHIP3007536"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490285"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 137..5743
/codon_start=1
/note="highly similar to Ankyrin-3"
/protein_id="BAG58523.1"
/transl_table=1
/translation="MSEEPKEKNAKPAHRKRKGKKSDANASYLRAARAGHLEKALDYI
KNGVDINICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQ
AEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPL
AVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDNNADVESKSG
FTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAK
IDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPWHMATQGDHLNCVQ
LLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIACK
KNRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGE
TALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASP
NAATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANL
LLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKK
NQMDIATTLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLGRNANVNLSNKSGLT
PLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVN
AKTKNGYTPLHQAAQQGHTHIINVLLQNNASPNELTVNGNTALGIARRLGYISVVDTL
KIVTEETMTTTTVTEKHKMNVPETMNEVLDMSDDEVRKANAPEMLSDGEYISDVEEGN
RCTWYKIPKVQEFTVKSEDAMTGDTDKYLGPQDLKELGDDSLPAEGYMGFSLGARSAS
LRSFSSDRSYTLNRSSYARDSMMIEELLVPSKEQHLTFTREFDSDSLRHYSWAADTLD
NVNLVSSPIHSGFLVSFMVDARGGSMRGSRHHGMRIIIPPRKCTAPTRITCRLVKRHK
LANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGSMRGKERELIVLRSENGET
WKEHQFDSKNEDLTELLNGMDEELDSPEELGKKRICRIITKDFPQYFAVVSRIKQESN
QIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVPDEIVKKILGNKATFSPIV
TVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTPNLRLLCSITGGTSPAQWEDIT
GTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQLYRELICVPYMAKFVVFAK
MNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVLEGKPIYVDCYGNLAPLT
KGGQQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGLPQTAVCNLNIT
LPAHKKIEKTERRQSFASLALRKRYSYLTEPGMSPQSPCERTDIRMAIVADHLGLSWT
ELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRI
DIVTLLEGPIFDYGNISGTRSFADENNVFHDPVDGYPSLQVELETPTGLHYTPPTPFQ
QDDYFSDISSIESPLRTPSRLSDGLVPSQGNIEHSADGPPVVTAEDASLEDSKLEDSV
PLTEMPEAVDVDESQLENVCLSWQNETSSGNLESCAQARRVTGGLLDRLDDSPDQCRD
SITSYLKGEAGKFEANGSHTEITPEAKTKSYFPESQNDVGKQSTKETLKPKIHGSGHV
EEPASPLAAYQKSLEETSKLIIEETKPCVPVSMKKMSRTSPADGKPRLSLHEEEGSSG
SEQKQGEGFKVKTKKEIRHVEKKSHS"
BASE COUNT 1780 a 1320 c 1365 g 1327 t
ORIGIN
1 aagcagcggc tgctttgcct ggggagcacc cgtaaatgga ctttggtctc aatgctttga
61 ctctttgccg tggttttgga tgttggaata ccggcggtga tctgtctttt ataaactcac
121 ctgatttaaa ggaaagatga gtgaagaacc aaaggagaaa aatgcaaaac ctgctcatag
181 gaaaaggaaa ggaaaaaagt ctgatgccaa tgcaagttac ttaagagcag ctcgagctgg
241 acaccttgaa aaggccctcg actacataaa aaatggagtt gacatcaaca tttgcaatca
301 gaatgggttg aacgctctcc accttgcttc caaagaaggc catgtagagg ttgtttctga
361 gctgctgcag agagaagcca atgtggatgc agctacaaag aaaggaaaca cagcattgca
421 catcgcatct ttggctgggc aagcagaggt ggtaaaagtc ttggttacaa atggagccaa
481 tgtcaatgca caatctcaga atggtttcac gccattgtat atggcagccc aggaaaatca
541 cctggaagtt gtcaagtttc ttcttgacaa tggtgcaagc cagagcctag ccacagagga
601 tggcttcaca ccattggcag tggctttgca acaaggtcac gaccaagtcg tttcgctcct
661 gctagagaat gacaccaaag gaaaagtgcg tctcccagct cttcatatcg cggcccgaaa
721 agacgacacg aaagccgccg ccctgctgct gcagaatgac aacaatgcag atgtggaatc
781 aaagagtggc ttcactccgc tccacatagc tgctcactat ggaaatatca atgtagccac
841 gttgctgtta aaccgagcgg ctgctgtgga tttcaccgca aggaatgaca tcactccttt
901 acatgttgca tcaaaaagag gaaatgcaaa tatggtaaaa ctattgctcg atcgaggagc
961 taaaatcgat gccaaaacca gggatggtct gacaccactg cactgtggag caaggagtgg
1021 ccacgagcag gtggtagaaa tgttgcttga tcgagctgcc cccattcttt caaaaaccaa
1081 gaatggatta tctccatggc acatggccac acaaggggat catttaaact gcgtccagct
1141 tctcctccag cataatgtac ccgtggatga tgtcaccaat gactacctga ctgccctaca
1201 cgtggctgcc cactgtggcc attacaaagt tgccaaggtt ctcttggata agaaagctaa
1261 ccccaatgcc aaagccctga atggctttac cccccttcat atcgcctgca agaagaatcg
1321 aattaaagta atggaactcc ttctgaaaca cggtgcatcc atccaagctg taaccgagtc
1381 gggccttacc ccaatccatg ttgctgcctt catggggcat gtaaatattg tatcacaact
1441 aatgcatcat ggagcctcac caaacaccac caatgtgaga ggagaaacag cactgcacat
1501 ggcagctcgc tccggccaag ctgaagttgt gcggtatctg gtacaagacg gagctcaggt
1561 agaagctaaa gctaaggatg accaaacacc actccacatt tcagcccgac tggggaaagc
1621 agacatagta caacagctgt tgcagcaagg ggcatctcca aatgcagcca caacttctgg
1681 gtacacccca cttcaccttt ccgcccgaga ggggcatgag gatgtggccg cgttcctttt
1741 ggatcatgga gcgtctttat ctataacaac aaagaaagga tttactcctc ttcatgtggc
1801 agcaaaatat ggaaagcttg aagtcgccaa tctcctgcta cagaaaagtg catctccaga
1861 tgctgctggg aagagcgggc taacaccact gcatgtagct gcacattacg ataatcagaa
1921 agtggccctt ctgcttttgg accaaggagc ctcacctcac gcagccgcaa agaatggtta
1981 tacgccactg cacatcgctg ccaaaaagaa ccagatggac atagcgacaa ctctgctgga
2041 atatggtgct gatgccaacg cagttacccg gcaaggaatt gcttccgtcc atctcgcagc
2101 tcaggaaggg cacgtggaca tggtgtcgct gctcctcggt agaaatgcga atgtgaacct
2161 gagcaataag agcggcctga ccccactcca tttggctgct caagaagatc gagtgaatgt
2221 ggcagaagtc ctcgtaaacc aaggggctca tgtggacgcc cagacaaaga tgggatacac
2281 accactgcat gtgggctgcc actatggaaa tatcaagatt gttaatttcc tgctccagca
2341 ttctgcaaaa gttaatgcca aaacaaagaa tgggtatacg ccattacatc aagcagcaca
2401 gcaggggcat acgcatataa taaatgtctt acttcagaac aacgcctccc ccaatgaact
2461 cactgtgaat gggaatactg cccttggcat tgcccggcgc ctcggctaca tctcagtagt
2521 ggacaccctg aagatagtga ccgaagagac catgaccaca actactgtca cagagaagca
2581 caaaatgaat gttccagaaa cgatgaatga agttcttgat atgtctgatg atgaagttcg
2641 taaagccaat gcccctgaaa tgctcagtga tggcgaatat atctcagatg ttgaagaagg
2701 taatagatgc acatggtaca aaattcccaa ggtacaagag tttacggtga aaagtgaaga
2761 tgcaatgacc ggggacacag acaaatatct tgggccacag gaccttaagg aattgggtga
2821 tgattccctg cctgcagagg gttacatggg ctttagtctc ggagcgcgtt ctgccagcct
2881 ccgctccttc agttcggata ggtcttacac cttgaacaga agctcctatg cacgggacag
2941 catgatgatt gaagaactcc ttgtgccatc caaagagcag catctaacat tcacaaggga
3001 atttgattca gattctctta gacattacag ctgggctgca gacaccttag acaatgtcaa
3061 tcttgtttca agccccattc attctgggtt tctggttagc tttatggtgg acgcgagagg
3121 gggctccatg agaggaagcc gtcatcacgg gatgagaatc atcattcctc cacgcaagtg
3181 tacggccccc actcgaatca cctgccgttt ggtaaagaga cataaactgg ccaacccacc
3241 ccccatggtg gaaggagagg gattagccag taggctggta gaaatgggtc ctgcaggggc
3301 acaattttta ggccctgtca tagtggaaat ccctcacttt gggtccatga gaggaaaaga
3361 gagagaactc attgttcttc gaagtgaaaa tggtgaaact tggaaggagc atcagtttga
3421 cagcaaaaat gaagatttaa ccgagttact taatggcatg gatgaagaac ttgatagccc
3481 agaagagtta gggaaaaagc gtatctgcag gattatcacg aaagatttcc cccagtattt
3541 tgcagtggtt tcccggatta agcaggaaag caaccagatt ggtcctgaag gtggaattct
3601 gagcagcacc acagtgcccc ttgttcaagc atctttccca gagggtgccc taactaaaag
3661 aattcgagtg ggcctccagg cccagcctgt tccagatgaa attgtgaaaa agatccttgg
3721 aaacaaagca acttttagcc caattgtcac tgtggaacca agaagacgga aattccataa
3781 accaatcaca atgaccattc cggtgccccc gccctcagga gaaggtgtat ccaatggata
3841 caaaggggac actacaccca atctgcgtct tctctgtagc attacagggg gcacttcgcc
3901 tgctcagtgg gaagacatca caggaacaac tcctttgacg tttataaaag attgtgtctc
3961 ctttacaacc aatgtttcag ccagattttg gcttgcagac tgccatcaag ttttagaaac
4021 tgtggggtta gccacgcaac tgtacagaga attgatatgt gttccatata tggccaagtt
4081 tgttgttttt gccaaaatga atgatcccgt agaatcttcc ttgcgatgtt tctgcatgac
4141 agatgacaaa gtggacaaaa ctttagagca acaagagaat tttgaggaag tcgcaagaag
4201 caaagatatt gaggttctgg aaggaaaacc tatttatgtt gattgttatg gaaatttggc
4261 cccacttacc aaaggaggac agcaacttgt ttttaacttt tattctttca aagaaaatag
4321 actgccattt tccatcaaga ttagagacac cagccaagag ccctgtggtc gtctgtcttt
4381 tctgaaagaa ccaaagacaa caaaaggact gcctcaaaca gcggtttgca acttaaatat
4441 cactctgcca gcacataaaa agattgagaa aacagaaaga cgacagagct tcgcatcctt
4501 agctttacgt aagcgctaca gctacttgac tgagcctgga atgagtccac agagtccatg
4561 tgaacggaca gatatcagga tggcaatagt agccgatcac ctgggactta gttggacaga
4621 actggcaagg gaactgaatt tttcagtgga tgaaatcaat caaatacgtg tggaaaatcc
4681 aaattcttta atttctcaga gcttcatgtt attaaaaaaa tgggttacca gagacggaaa
4741 aaatgccaca actgatgcct taacttcggt cttgacaaaa attaatcgaa tagatatagt
4801 gacactgcta gaaggaccaa tatttgatta tggaaatatt tcaggcacca gaagttttgc
4861 agatgagaac aatgttttcc atgaccctgt tgatggttat ccttcccttc aagtggaact
4921 ggaaaccccc acagggttgc actacacacc acctacccct ttccagcaag atgattattt
4981 tagtgatatc tctagcatag aatctcccct tagaacccct agtagactga gtgatgggct
5041 agtgccttcc caggggaaca tagagcattc cgcagatgga cctccagtcg taactgcaga
5101 agatgcttcc ttagaagaca gcaaactgga agactcagtg cctttaacag aaatgcctga
5161 agcagtggat gtagatgaga gccagttgga gaatgtatgt ctgagttggc agaatgagac
5221 atcaagtgga aacctagagt cctgcgctca agctcgaaga gtaactggtg ggttactaga
5281 tcgactggat gacagccctg accagtgtag agattccatt acctcatatc tcaaaggaga
5341 agctggcaaa tttgaagcaa atggaagcca tacagaaatc actccagaag caaagacaaa
5401 atcttacttt ccagaatccc aaaatgatgt aggaaaacag agtaccaagg aaactctgaa
5461 accaaaaata catggatctg gtcatgttga agaaccagca tcaccactag cagcatatca
5521 gaaatctcta gaagaaacca gcaagcttat aatagaagag actaaaccct gtgtgcctgt
5581 cagtatgaaa aagatgagta ggacttctcc agcagatggc aagccaaggc ttagcctcca
5641 tgaagaagag gggtccagtg ggtctgagca aaagcaggga gaaggtttta aggtgaaaac
5701 gaagaaagaa atccggcatg tggaaaagaa gagccactcg taacagcgaa cggtcagtca
5761 aggatcataa gtttttactg ccagtattga ga
//