LOCUS AK295658 1145 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56973 complete cds, highly similar to
Transmembrane protein 16C.
ACCESSION AK295658
VERSION AK295658.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1145)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1145
/clone="BRHIP3006451"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490282"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 2..1126
/codon_start=1
/note="highly similar to Transmembrane protein 16C"
/protein_id="BAH12144.1"
/transl_table=1
/translation="MLLNLAYEKIAYLLTNLEYPRTESEWENSFALKMFLFQFVNLNS
SIFYIAFFLGRFVGHPGKYNKLFDRWRLEECHPSGCLIDLCLQMGVIMFLKQIWNNFM
ELGYPLIQNWWSRHKIKRGIHDASIPQWENDWNLQPMNLHGLMDEYLEMVLQFGFTTI
FVAAFPLAPLLALLNNIIEIRLDAYKFVTQWRRPLPARATDIGIWLGILEGIGILAVI
TNAFVIAITSDYIPRFVYEYKYGPCANHVEPSENCLKGYVNNSLSFFDLSELGMGKSG
YCRYRDYRGPPWSSKPYEFTLQYWHILAARLAFIIVFEHLVFGIKSFIAYLIPDVPKG
LHDRIRREKYLVQEMMYEAELEHLQQQRRKSGQPVHHEWP"
BASE COUNT 317 a 238 c 246 g 344 t
ORIGIN
1 tatgttgctg aatcttgctt atgaaaaaat tgcttacctc ctcaccaatt tagaatatcc
61 tcgaacagaa tcagagtggg aaaacagctt cgccctgaag atgttcctct tccagtttgt
121 caatttaaac agttccatct tctatatcgc tttctttttg ggaagattcg taggccaccc
181 aggaaaatac aataaacttt ttgaccggtg gagactggag gaatgtcatc ctagtggctg
241 tttgatagac ctctgcctcc agatgggtgt catcatgttt ttgaagcaaa tatggaacaa
301 cttcatggaa ctaggatacc cgttgatcca gaactggtgg tcacgacata aaatcaagcg
361 gggaatacat gatgcttcca tacctcagtg ggaaaatgat tggaatctgc agcccatgaa
421 ccttcatgga ctgatggatg agtacttaga aatggttttg caatttggtt ttaccaccat
481 ctttgttgcg gcttttcctc tagcccctct tttggctttg ttaaacaata tcattgaaat
541 caggctggat gcatacaaat ttgtcactca atggcggagg cctttgccag cccgagcaac
601 tgacataggt atctggcttg gaattctcga aggaatcggt atattggctg tgatcaccaa
661 tgcatttgta attgctatta cttctgatta catcccacgt tttgtttatg aatacaaata
721 tggcccctgt gcaaatcatg tagaaccaag tgaaaattgc ttgaagggat atgtcaacaa
781 tagcctatcc ttctttgacc tgagtgagct tggtatggga aaatctggtt attgcaggta
841 cagagactac agaggcccgc cctggagttc caaaccctat gagtttactt tacaatactg
901 gcatatcctt gctgctagat tggccttcat tattgtgttt gagcaccttg tttttgggat
961 taagtcattc atcgcatacc tgattccaga cgtaccaaag ggtctacatg accgaatacg
1021 acgagagaag tacttagttc aagaaatgat gtatgaggct gaactggaac atttgcaaca
1081 acaacggaga aaaagtggtc agcctgttca ccatgaatgg ccttagttga cacctgttac
1141 ccatt
//