LOCUS AK295633 2009 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50012 complete cds, highly similar to
Potassium voltage-gated channel subfamily H member 8.
ACCESSION AK295633
VERSION AK295633.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2009)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2009
/clone="BRHIP3003969"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490257"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 243..1871
/codon_start=1
/note="highly similar to Potassium voltage-gated channel
subfamily H member 8"
/protein_id="BAH12134.1"
/transl_table=1
/translation="MPVMKGLLAPQNTFLDTIATRFDGTHSNFILANAQVAKGFPIVY
CSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEKSLEEKTEFKGEIMFYKK
NGSPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITPEDKKEDKVKGRSRAGTHF
DSARRRSRAVLYHISGHLQRREKNKLKINNNVFVDKPAFPEYKVSDAKKSKFILLHFS
TFKAGWDWLILLATFYVAVTVPYNVCFIGNDDLSTTRSTTVSDIAVEILFIIDIILNF
RTTYVSKSGQVIFEARSICIHYVTTWFIIDLIAALPFDLLYAFNVTVVSLVHLLKTVR
LLRLLRLLQKLDRYSQHSTIVLTLLMSMFALLAHWMACIWYVIGKMEREDNSLLKWEV
GWLHELGKRLESPYYGNNTLGGPSIQSAYIAALYFTLSSLTSVGFGNVSANTDAEKIF
SICTMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLKDFIRVHHLPQQLKQRML
EYFQTTWSVNNGIDSNEVMFISHVVFRQKAHILR"
BASE COUNT 534 a 476 c 434 g 565 t
ORIGIN
1 gagcctggag gtgcggggcg ggctcgggga gcgctcttgg ggctcctcct gccacagccg
61 gggcggctgg aactctctcc ctttctccct ccatccttcc acttcccctg ctcggccccg
121 ccgtcaggcc gggtccccct tccctgccgt catcaggttc cccttctccc ttcttggcac
181 tttcctttcg aaccatcctt ctggacaaac tttgatggag aatttcacac cacgctggaa
241 aaatgccggt tatgaaagga ttactggcgc cgcaaaacac cttcctggac accatcgcca
301 cccgttttga cggaacacat agcaacttca tccttgccaa tgcccaggtg gctaagggtt
361 tccccatagt ctactgttcc gatggcttct gcgagcttgc tggatttgcc cgaactgaag
421 tcatgcagaa gagttgtagc tgcaagttct tatttggggt tgaaaccaat gagcaactga
481 tgcttcaaat agaaaagtca ctggaggaga aaacagaatt caaaggagaa attatgttct
541 acaagaaaaa cgggtctcca ttttggtgcc tactggatat tgttcccata aagaatgaaa
601 aaggagatgt agtacttttt ctggcctcgt tcaaagatat aacagataca aaagtgaaga
661 ttactccaga agataaaaaa gaagacaaag tcaaaggaag atcaagagca gggacccact
721 ttgactcagc ccggagacgg agtcgagcag tcctttatca catctctggg cacctgcaaa
781 gaagagaaaa gaacaaattg aaaataaata acaatgtttt tgtagataaa ccagcatttc
841 cggagtataa agtttctgat gcaaaaaagt ccaaattcat acttctgcat tttagcactt
901 ttaaagctgg ctgggactgg cttattttgt tggcaacgtt ttatgttgct gtgactgtac
961 cttacaacgt ttgctttatt ggcaatgacg acctgtccac aactcggagc acaaccgtca
1021 gtgacattgc agtggagatt ctttttatta tagatattat tttaaatttc cgaacaactt
1081 atgtcagcaa gtctggccaa gttatctttg aagcaagatc aatttgcatc cactatgtca
1141 caacctggtt catcattgat ttaatcgctg ccctgccttt tgatcttctg tatgctttca
1201 acgtcacagt ggtgtctctc gtgcatcttc taaagacagt gcgcctcttg cgtcttttgc
1261 gtctgctgca gaagttagac cgctattccc aacacagtac tatcgtcctg actctgctca
1321 tgtccatgtt tgcactcctt gcacactgga tggcgtgtat ctggtacgtc attggaaaaa
1381 tggagaggga agacaacagc cttctgaagt gggaagttgg ttggcttcat gagttgggaa
1441 agagactgga atctccatac tatggcaaca ataccttggg gggcccgtcg atccaaagtg
1501 cctatattgc cgctctgtac ttcacgctga gcagcctcac cagcgtgggt tttgggaacg
1561 tctctgctaa tacagatgca gaaaagatct tctccatctg caccatgctg attggtgcct
1621 tgatgcacgc cttggtgttt ggaaacgtga cagcaatcat acagaggatg tactccagat
1681 ggtccctcta tcacactaga actaaggatc tgaaagattt catccgtgtc catcacttgc
1741 cccaacaact caagcagagg atgctcgaat attttcaaac aacctggtca gtcaacaatg
1801 gaatagattc aaatgaggta atgttcattt ctcatgttgt tttcaggcag aaagcacata
1861 ttctaaggta aacgcaagat gttctaatgc aggtatcaga agtgaaaagc ataccaactt
1921 ctttattcct ttacattttt aattattcat gaatcccaat ccatcttctt tcacttgctt
1981 tggcttgtgt tttcacaatg ccaatttgg
//