LOCUS AK295623 3615 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51206 complete cds, moderately similar to
Periplakin.
ACCESSION AK295623
VERSION AK295623.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3615)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3615
/clone="BRHIP3002813"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490247"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 270..770
/codon_start=1
/note="moderately similar to Periplakin"
/protein_id="BAH12130.1"
/transl_table=1
/translation="MQSDLARLQEGRQPEHRDVTLQKVLDSEKLLYVLEADAAIAKHM
KHPQGDMIAEDIRQLKERVTNLRGKHKQIYRLAVKEVSYRPRSPSWVRWSRTCRRPSS
ARAHWPAASRSTARTWSARRPRCTSWASVSTTCASRWNAGRRAYRAPRQPTSTSTAAM
TTCCSS"
BASE COUNT 961 a 906 c 1264 g 484 t
ORIGIN
1 atgacaccag gatttggaag ccaggagatt cccattggtg atggggagtg gaggctcatg
61 gaggtgaagt gacttgcccc acagtcactc agctcgtcaa ttggggagct agaatatgac
121 cctaagccag ttcctgcctc tttgctgtcc tagaaccatc tgcctgtaac agcacaagca
181 tctctaacaa ggagctctcg gagctgatcg agcagctgca gaagaatgcc gaccaggtgg
241 agaagaacat cgtggacaca gaggccaaga tgcagagtga cctggctcgg ctgcaggagg
301 gtcggcagcc tgagcaccgg gacgtgaccc tgcagaaggt gttggactct gagaagctgc
361 tctatgtgct agaggcggat gcggccattg ccaagcacat gaagcaccca cagggggaca
421 tgatcgccga ggatatccgc cagctgaagg agcgtgtgac caacctgcgc gggaaacaca
481 agcagatcta caggctggcg gtgaaggaag tgagttacag gcccagaagt ccctcctggg
541 tgaggtggag cagaacttgc aggcggccaa gcagtgctcg agcacactgg ccagccgctt
601 ccaggagcac tgcccggacc tggagcgcca ggaggccgag gtgcacaagc tgggccagcg
661 tttcaacaac ctgcgccagc aggtggaacg cagggcgcag agcctacaga gcgccaaggc
721 agcctacgag cacctccacc gcggccatga ccacgtgctg cagttcctag tcagcatccc
781 cagttacgag ccccaggaga cagacagcct cagccagatg gagaccaagc tgaagaacca
841 gaagaacctg ctagatgaga tagcaagtag ggagcaggaa gtacagaaga tctgtgccaa
901 ttcccagcag taccagcaag ctgtaaagga ctatgagtta gaagcagaaa aactaaggtc
961 tcttctcgac ttggagaatg gaaggagcag ccacgtgagc aagagagcca ggctccaatc
1021 tcctgccacc aaagtgaagg aagaggaagc agcacttgcc gccaagttca ctgaagttta
1081 tgccatcaac agacagaggc tgcagaatct ggagtttgct ctgaatctcc tcagacagca
1141 gccggaagta gaagtgaccc atgagaccct gcaaaggaat aggccggact ctggagtgga
1201 ggaggcgtgg aagatcagga aggaactgga tgaggagact gagcggaggc ggcagctgga
1261 gaacgaggtc aagagcaccc aggaagaaat ctggaccttg aggaatcagg ggcctcagga
1321 atcggtggtg aggaaggagg tgctcaagaa ggtgccggat cccgtgctgg aggagagctt
1381 ccagcagctg cagcggacgc tggcagagga gcagcacaag aaccagctgc tgcaggagga
1441 gctggaggca ctgcagctgc agctgcgtgc cctggagcag gagaccagag acggggggca
1501 ggagtacgtg gtcaaggagg tcctgcgcat cgagcctgac agggcccagg tggatgaggt
1561 cttgcagctg cgggaggagc tggaggcact gaggcggcag aagggcgccc gggaggcaga
1621 ggtgctcctc ctgcagcagc gtgtggccgc cctggctgaa gagaagagcc gggcgcagga
1681 gaaggtcaca gagaaagagg tggtgaaact gcagaatgac ccccagctgg aggcagagta
1741 ccagcagctg caggaggacc accagcgcca ggaccagctc agggagaagc aggaggagga
1801 gctgagcttc ctccaggaca agctcaagag gctagagaag gagcgggcca tggccgaggg
1861 caagatcacc gtcaaggagg tgctcaaggt ggagaaggac gcggccaccg agagggaggt
1921 cagcgatctc acccgccaat atgaggacga ggctgccaag gctcgcgcta gccagaggga
1981 gaagacggag ctgctccgaa agatatgggc cttggaggag gagaacgcca aagtggtggt
2041 gcaggagaag gtgcgggaga tcgtgcggcc agaccccaag gcggaaagtg aagtggcgaa
2101 cctccgcctg gagcttgtgg agcaggagcg aaagtaccgg ggtgccgagg agcagctccg
2161 gagctaccag agtgagctgg aggccctcag gaggcgaggc ccccaggtgg aagtcaaaga
2221 ggtgactaag gaagtcatta agtacaagac tgaccctgag atggagaagg agcttcagcg
2281 gctcagggag gagatcgtgg acaagaccag actgatcgaa aggtgtgatt tagagatcta
2341 ccagctgaaa aaggaaatcc aggccctgaa agacaccaaa ccccaggtcc agaccaaaga
2401 ggtggtccag gagatcctcc aattccaaga agaccctcaa accaaggagg aggtggcgtc
2461 tctgagggca aagctctcag aggagcagaa gaaacaagtg gatctggaga gggaaagagc
2521 ttcccaggaa gagcagatcg cccggaaaga ggaggagctc tcgcgggtga aggaaagggt
2581 ggtgcagcag gaggtggtca ggtatgagga ggagccaggc ctgcgggccg aggcgagcgc
2641 ctttgccgag agcatcgatg tggagctgcg gcagattgac aagctgcggg cagagctgcg
2701 gcggctgcag cgccggcgca ccgagcttga gcggcagctg gaggagctag agcgcgagcg
2761 gcaggcccgc agggaggccg agcgcgaggt acagcggttg cagcagcggc tggcagcgct
2821 ggagcaggaa gaagctgagg cccgtgagaa ggtaacccat acgcagaagg tggtgctgca
2881 gcaggacccg cagcaggcgc gagagcatgc cctgctccga ctccagctgg aagaagagca
2941 gcaccggcgg cagctcctgg agggggagct cgagaccctc cggaggaaac tggctgcact
3001 ggagaaggcg gaggtcaagg agaaggtggt gctctccgag agtgtccagg tggagaaggg
3061 cgacaccgag caagagatcc agaggctcaa gagcagcctg gaggaggaga gccgcagcaa
3121 gcgcgagctg gacgtcgagg tgagccggct ggaagccagg ctttcggagc tggaattcca
3181 taactccaag tcatccaagg aactagactt tctgagggaa gagaaccaca aattacagct
3241 ggagaggcaa aacctgcagc tggagacccg aaggctccaa tcggaaatca acatggcagc
3301 gacggaaaca cgagacctgc ggaacatgac cgtggcggac tctgggacca accatgactc
3361 cagactgtgg tccctggaga gggaactgga tgacctcaag aggctctcca aggacaaaga
3421 cctcgagatc gacgagctgc agaagcgcct gggctccgtg gccgtcaagc gggagcagcg
3481 ggagaaccac ctgcggcgct ccatcgtagt catccaccct gacacaggcc gcgagctgtc
3541 cccggaggaa gcccaccgtg ccgggctcat tgactgggaa catgttcgtg aaactcagaa
3601 gccaggagtg cgact
//