LOCUS AK295580 1023 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ60562 complete cds, highly similar to
Bestrophin-1.
ACCESSION AK295580
VERSION AK295580.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1023)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1023
/clone="BRHIP2025106"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490204"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 114..926
/codon_start=1
/note="highly similar to Bestrophin-1"
/protein_id="BAH12111.1"
/transl_table=1
/translation="MTITYTSQVANARLGSFSRLLLCWRGSIYKLLYGEFLIFLLCYY
IIRFIYRLALTEEQQLMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPW
PDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQA
GFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLR
TQCGHLYAYDWISIPLVYTQPEQRGDGVPAQSGGRGGCSRWHHWPLPRPAVP"
BASE COUNT 226 a 329 c 263 g 205 t
ORIGIN
1 acagagtccc agggagtccc accagcctag tcgccagacc ttctgtggga tcatcggacc
61 cacctggaac cccacctgac ccaagcccac ctgctgcagc ccactgcctg gccatgacca
121 tcacttacac aagccaagtg gctaatgccc gcttaggctc cttctcccgc ctgctgctgt
181 gctggcgggg cagcatctac aagctgctat atggcgagtt cttaatcttc ctgctctgct
241 actacatcat ccgctttatt tataggctgg ccctcacgga agaacaacag ctgatgtttg
301 agaaactgac tctgtattgc gacagctaca tccagctcat ccccatttcc ttcgtgctgg
361 gcttctacgt gacgctggtc gtgacccgct ggtggaacca gtacgagaac ctgccgtggc
421 ccgaccgcct catgagcctg gtgtcgggct tcgtcgaagg caaggacgag caaggccggc
481 tgctgcggcg cacgctcatc cgctacgcca acctgggcaa cgtgctcatc ctgcgcagcg
541 tcagcaccgc agtctacaag cgcttcccca gcgcccagca cctggtgcaa gcaggcttta
601 tgactccggc agaacacaag cagttggaga aactgagcct accacacaac atgttctggg
661 tgccctgggt gtggtttgcc aacctgtcaa tgaaggcgtg gcttggaggt cgaatccggg
721 accctatcct gctccagagc ctgctgaacg agatgaacac cttgcgtact cagtgtggac
781 acctgtatgc ctacgactgg attagtatcc cactggtgta tacacagcct gaacaaagag
841 gagatggagt tccagcccaa tcaggaggac gaggaggatg ctcacgctgg catcattggc
901 cgcttcctag gcctgcagtc ccatgatcac catcctccca gggcaaactc aaggaccaaa
961 ctactgtggc ccaagaggga atcccttctc cacgagggcc tgcccaaaaa ccacaaggca
1021 gcc
//