LOCUS AK295579 2292 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58798 complete cds, highly similar to
Transcription factor IIIB 90 kDa subunit.
ACCESSION AK295579
VERSION AK295579.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2292)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2292
/clone="BRHIP2025001"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490203"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 331..2019
/codon_start=1
/note="highly similar to Transcription factor IIIB 90 kDa
subunit"
/protein_id="BAG58477.1"
/transl_table=1
/translation="MAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVN
VYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRD
WMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQL
TIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIELE
NSRPKAKGGLASLAKDGSTEDTASSLCGEEDTEDEELEAAASHLNKDLYRELLGGAPG
SSEAAGSPEWGGRPPALGSLLDPLPTAASLGISDSIRECISSQSSDPKDASGDGELDL
SGIDDLEIDRYILNESEARVKAELWMRENAEYLREQREKEARIAKEKELGIYKEHKPK
KSCKRREPIQASTAREAIEKMLEQKKISSKINYSVLRGLSSAGGGSPHREDAQPEHSA
SARKLSRRRTPASRSGADPVTSVGKRLRPLVSTQPAKKVATGEALLPSSPTLGAEPAR
PQAVLVESGPVSYHADEEADEEEPDEEDGEPCVSALQMMGSNDYGCDGDEDDGY"
BASE COUNT 517 a 649 c 761 g 365 t
ORIGIN
1 acaaccgagt cctgcgcgcc ccgtgcgccg ggggtcgctc ccaggccgag gtctgacagt
61 gtcgccgaac gcgaaaggaa gcgtgtggta cccgagagag gaagcaccct cgtcaccccg
121 gccggcaccg cattgaggca ggtgtgcagg tgcggttgcg gcgagccagg tgctggcaaa
181 accccgactc tgggtggcgg cttccacgtg aatctgggga aggagtcgag agcgcagacc
241 ctgcagaatg ggaggcgcca catccaccac ctggggaacc agctgcagct gaaccagcac
301 tgcctggaca ccgccttcaa cttcttcaag atggccgtga gcaggcacct gacccgcggc
361 cggaagatgg cccacgtgat tgctgcctgc ctctacctgg tctgccgtac ggagggcacg
421 ccgcacatgc tcctggacct cagcgacctg ctccaggtga atgtgtacgt gcttggaaag
481 acgtttcttc tcttggcaag agagctctgc atcaatgcgc cggccataga cccgtgcctg
541 tatattccac gctttgcgca cctgctggaa ttcggggaga agaaccacga ggtgtccatg
601 actgccctga ggctcctaca gaggatgaag cgggactgga tgcacacagg ccggcgcccc
661 tcgggcctct gcggagcagc gctcctggtt gcagccagaa tgcatgactt caggaggact
721 gtgaaggagg tcatcagtgt ggtcaaagtg tgtgagtcca cgctgcggaa gaggctcacg
781 gaatttgaag acacccccac cagtcagttg accattgatg agttcatgaa gatcgacctg
841 gaggaggagt gcgacccccc ctcgtacaca gctgggcaga ggaagctgcg gatgaagcag
901 cttgaacaag tcctgtcaaa aaaactggag gaggttgaag gtgaaatatc cagttaccag
961 gatgcaattg agattgaact agaaaacagc cggccaaagg ccaagggggg cctggccagc
1021 ctggcaaaag atggctccac cgaggacacc gcgtccagct tgtgtggcga ggaggacaca
1081 gaggacgagg agctggaagc cgcggccagc cacctgaaca aagacttata ccgggagctc
1141 cttggtggtg cccccggcag ctcggaagca gcaggaagcc ccgagtgggg cggcagacct
1201 ccggccctgg ggtccctgct ggaccccctc cccactgcag ccagcctggg catctcagac
1261 tccatccgcg aatgcatctc ctctcagagc agcgacccca aagatgcttc aggagacggt
1321 gagctggacc tcagtggcat tgatgacctg gagattgaca ggtacatcct gaatgagtcg
1381 gaagcccgcg tgaaggccga gctgtggatg agggagaacg ccgagtacct gcgggaacag
1441 agggaaaaag aagcaagaat agcgaaagag aaggagctcg gcatctacaa ggaacacaag
1501 cccaagaagt cttgcaagcg acgggagcca attcaggcca gtaccgccag ggaggccatc
1561 gagaagatgc tggagcagaa gaagatctcc agcaagatta attatagcgt gctccggggc
1621 ctcagcagcg ccggcggggg cagtccgcac agggaggatg cacagcccga gcatagcgcc
1681 agtgccagga agctgtcacg aaggaggacg ccggccagca gaagtggggc tgaccctgtg
1741 accagtgtgg ggaaaaggtt gaggcctctg gtgtctacgc agccagcaaa gaaggtggcc
1801 acgggagagg ctttgctccc aagctctccc accctcggag ctgagcctgc caggccccag
1861 gcggtgctgg tggagagcgg gcccgtgtca taccacgccg acgaggaggc tgacgaggag
1921 gagcctgacg aggaggacgg ggagccctgc gtcagtgccc tgcagatgat gggcagcaac
1981 gactatggct gtgatggcga tgaggacgac ggctactgaa gtgtggcctc caggcaggtg
2041 atgtcctggc agggggcctc gcgggtctcc tcagcatcag acgggcttcc aggaccgcag
2101 caggcaggcc ccagcgccga gactcctggt gacaggtggc acctgtccca cagccctcgt
2161 cccatgtgga acttaccatt gggattgtgt ttctattcag caagggaaac cggaccaagc
2221 gtctgcatgt gtgtgatcag atgtgggccg ggtgtgtgca gggctgggtc ccgctgcctg
2281 ccgtcgactc at
//