LOCUS AK295570 1350 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55845 complete cds, highly similar to
Spectrin beta chain, brain 1.
ACCESSION AK295570
VERSION AK295570.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1350)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1350
/clone="BRHIP2023093"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490194"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 13..1077
/codon_start=1
/note="highly similar to Spectrin beta chain, brain 1"
/protein_id="BAG58470.1"
/transl_table=1
/translation="MVPCAVLEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEK
LIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPPSPEPSTKVSEE
AESQQQWDTSKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGATEQRTSSKESSPIPSP
TSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSRSWHNVYCV
INNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLNDGNEYL
FQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESSPGK
REKDKEKDKEKRFSLFGKKK"
BASE COUNT 389 a 346 c 333 g 282 t
ORIGIN
1 gtgtactaac tcatggtacc ctgtgcagtt ctggaggtcc atcagttctc aagagacgcc
61 agtgtggccg aggcctggct gcttggacag gagccgtacc tatccagccg agagataggc
121 cagagcgtgg acgaggtgga gaagctcatc aagcgccacg aggcatttga aaagtctgca
181 gcaacctggg atgagaggtt ctctgccctg gaaaggctga ctacattgga gttactggaa
241 gtgcgcagac agcaagagga agaggagagg aagaggcggc caccttctcc cgagccgagc
301 acgaaggttt cagaggaagc cgagtcccag cagcagtggg atacttcaaa aggagaacaa
361 gtttcccaaa acggtttgcc agctgaacag ggatctccac ggatggcaga aacggtggac
421 acaagcgaaa tggtcaacgg cgctacagaa caaaggacga gctctaaaga gtccagcccc
481 atcccctccc cgacctctga tcgtaaagcc aagactgccc tcccagccca gagtgccgcc
541 accttaccag ccagaaccca ggagacacct tcggcccaga tggaaggctt cctcaatcgg
601 aaacacgagt gggaggccca caataagaaa gcctcaagca ggtcctggca caatgtttat
661 tgtgtcataa ataaccaaga aatgggtttc tacaaagatg caaagactgc tgcttctgga
721 attccctacc acagcgaggt ccctgtgagt ttgaaagaag ctgtctgcga agtggccctt
781 gattacaaaa agaagaaaca cgtattcaag ctaagactaa atgatggcaa tgagtacctc
841 ttccaagcca aagacgatga ggaaatgaac acatggatcc aggctatctc ttccgccatc
901 tcctctgata aacacgaggt gtctgccagc acccagagca cgccagcatc cagccgcgcg
961 cagaccctcc ccaccagcgt cgtcaccatc accagcgagt ccagtcccgg caagcgggaa
1021 aaggacaaag agaaagacaa agagaagcgg ttcagccttt ttggcaaaaa gaaatgaact
1081 cctttccttc acctcctgcc cttctcttac cttttcagtg aaattccagc atgcaagctc
1141 agaaccaaca cattactctc tgtgcctaat gttcctcaat gtggttgatt tttttttttt
1201 tttaatttat agagcatttc ggggggggtg ggggaaacac acctaaacac tttatctcca
1261 agttacaaaa gtttgaggtg cagagggaag gccagatttt ttttttaatg aaattatata
1321 gattagatct cagtatttaa actgttcctc
//