LOCUS AK295564 1520 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55211 complete cds, highly similar to
Glia-derived nexin precursor.
ACCESSION AK295564
VERSION AK295564.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1520)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1520
/clone="BRHIP2021658"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490188"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 106..1335
/codon_start=1
/note="highly similar to Glia-derived nexin precursor"
/protein_id="BAG58464.1"
/transl_table=1
/translation="MSDCRSSLVEGTMNWHLPLFLLASVTLPSICSHFNPLSLEELGS
NTGIQVFNQIVKSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLAMVMRYGVNGVGK
ILKKINKAIVSKKNKDIVTVANAVFVKNASEIEVPFVTRNKDVFQCEVRNVNFEDPAS
ACDSINAWVKNETRDMIDNLLSPDLIDGVLTRLVLVNAVYFKGLWKSRFQPENTKKRT
FVAADGKSYQVPMLAQLSVFRCGSTSAPNDLWYNFIELPYHGESISMLIALPTESSTP
LSAIIPHISTKTIDSWMSIMVPKRVQVILPKFTAVAQTDLKEPLKVLGITDMFDSSKA
NFAKITRSENLHVSHILQKAKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFLFFI
RHNPTGAVLFMGQINKP"
BASE COUNT 413 a 359 c 363 g 385 t
ORIGIN
1 gcggtgtggg gaaagccttt aacttggcct ctggcagccg atttaacccg agcgagcagg
61 tctttgctat tttcatcatc tgtagaaacg ggagttgcga ggcggatgag tgactgcagg
121 tcgtccttgg tggaaggaac catgaactgg catctccccc tcttcctctt ggcctctgtg
181 acgctgcctt ccatctgctc ccacttcaat cctctgtctc tcgaggaact aggctccaac
241 acggggatcc aggttttcaa tcagattgtg aagtcgaggc ctcatgacaa catcgtgatc
301 tctccccatg ggattgcgtc ggtcctgggg atgcttcagc tgggggcgga cggcaggacc
361 aagaagcagc tcgccatggt gatgagatac ggcgtaaatg gagttggtaa aatattaaag
421 aagatcaaca aggccatcgt ctccaagaag aataaagaca ttgtgacagt ggctaacgcc
481 gtgtttgtta agaatgcctc tgaaattgaa gtgccttttg ttacaaggaa caaagatgtg
541 ttccagtgtg aggtccggaa tgtgaacttt gaggatccag cctctgcctg tgattccatc
601 aatgcatggg ttaaaaatga aaccagggat atgattgaca atctgctgtc cccagatctt
661 attgatggtg tgctcaccag actggtcctc gtcaacgcag tgtatttcaa gggtctgtgg
721 aaatcacggt tccaacccga gaacacaaag aaacgcactt tcgtggcagc cgacgggaaa
781 tcctatcaag tgccaatgct ggcccagctc tccgtgttcc ggtgtgggtc gacaagtgcc
841 cccaatgatt tatggtacaa cttcattgaa ctgccctacc acggggaaag catcagcatg
901 ctgattgcac tgccgactga gagctccact ccgctgtctg ccatcatccc acacatcagc
961 accaagacca tagacagctg gatgagcatc atggtgccca agagggtgca ggtgatcctg
1021 cccaagttca cagctgtagc acaaacagat ttgaaggagc cgctgaaagt tcttggcatt
1081 actgacatgt ttgattcatc aaaggcaaat tttgcaaaaa taacaaggtc agaaaacctc
1141 catgtttctc atatcttgca aaaagcaaaa attgaagtca gtgaagatgg aaccaaagct
1201 tcagcagcaa caactgcaat tctcattgca agatcatcgc ctccctggtt tatagtagac
1261 agaccttttc tgtttttcat ccgacataat cctacaggtg ctgtgttatt catggggcag
1321 ataaacaaac cctgaagagt atacaaaaga aaccatgcaa agcaacgact actttgctac
1381 gaagaaagac tcctttcctg catctttcat agttctgtta aatatttttg tacatcgctt
1441 ctttttcaaa actagttctt aggaacagac tcgatgcaag tgtttctgtt ctgggaggta
1501 ttggggggaa aaaacaagca
//